Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 U3.7-201ENST00000363668 216 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 RNU6-173P-201ENST00000364215 104 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 SNORD14B-201ENST00000364533 90 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 RNU6-1074P-201ENST00000383995 104 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 RNU6-514P-201ENST00000384208 107 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 SNORA51.8-201ENST00000384234 132 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 RNU6-102P-201ENST00000384485 104 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 BTF3L4P2-201ENST00000392798 346 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 TMSB10P2-201ENST00000416049 131 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 RPS6P12-201ENST00000432491 726 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 AC138761.5-201ENST00000433967 325 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 OR6D1P-201ENST00000436165 939 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 RPL23AP81-201ENST00000455252 467 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 RPL7P47-201ENST00000497299 556 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 RNU7-200P-201ENST00000516105 62 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 AC023575.1-201ENST00000580510 358 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 AC011476.5-201ENST00000615594 130 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 AC090607.5-201ENST00000615692 224 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 AC009812.4-201ENST00000569134 1805 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 AC090740.1-201ENST00000623193 2262 ntBASIC5.11□□□□□ -1.59
HRH3Q9Y5N1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 AC092376.2-201ENST00000622621 4116 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 RNU4-9P-201ENST00000364951 139 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 RNU1-136P-201ENST00000384181 164 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 Y_RNA.504-201ENST00000384481 104 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 MIR10A-201ENST00000385043 110 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 MIR1286-201ENST00000408112 78 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 HSPE1P25-201ENST00000455484 251 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 snoU13.30-201ENST00000458951 104 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 RPL21P104-201ENST00000464143 478 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 TOMM22P6-201ENST00000465035 409 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 RPS26P21-201ENST00000475397 348 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 AL049874.1-201ENST00000489560 388 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 ATP5F1P5-201ENST00000526403 760 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 AC005476.1-201ENST00000554427 397 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 AC060780.2-201ENST00000589047 198 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 AL391684.1-202ENST00000641293 1636 ntBASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
HRH3Q9Y5N1 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 SNORA25.1-201ENST00000362326 128 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 RNU6-1301P-201ENST00000362724 104 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 RNU1-19P-201ENST00000363306 165 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 RNU6-47P-201ENST00000383866 107 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 RNU6-1117P-201ENST00000384525 104 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AC009804.1-201ENST00000400949 179 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 RNU2-61P-201ENST00000411069 191 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 Z82188.1-201ENST00000436709 154 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 HIGD1AP2-201ENST00000446367 280 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AL359073.1-201ENST00000448036 403 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 U8.22-201ENST00000459141 133 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 RPS29P27-201ENST00000463711 170 ntBASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.09□□□□□ -1.59
HRH3Q9Y5N1 AC100832.1-201ENST00000471945 383 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms