Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 RNA5SP319-201ENST00000362768 119 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 RNU6-227P-201ENST00000362865 103 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 RPL21P75-201ENST00000396599 483 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 RPL21P28-201ENST00000401418 483 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 MIR1290-201ENST00000408735 78 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 RNA5SP36-201ENST00000410197 133 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 RNU2-33P-201ENST00000410344 192 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 RNU2-14P-201ENST00000411053 191 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AL590556.1-201ENST00000423231 483 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AC079780.1-201ENST00000428259 207 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AL138899.2-201ENST00000439139 499 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AC079354.2-201ENST00000453523 154 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 RPL21P11-201ENST00000461458 483 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 RPL21P39-201ENST00000463605 483 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 RN7SL51P-201ENST00000468230 285 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AC132942.1-201ENST00000486753 483 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AC093591.1-201ENST00000491435 481 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 RPL21P16-201ENST00000495531 483 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 RNA5SP290-201ENST00000517133 127 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 NDUFB4P11-201ENST00000560510 395 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AC040958.1-201ENST00000561102 201 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 MIR1273E-201ENST00000581165 102 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AC233702.9-201ENST00000581528 203 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 FO393422.1-201ENST00000603908 708 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AL691477.1-201ENST00000624398 162 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AL450472.1-202ENST00000637286 180 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 AC073869.10-201ENST00000642016 354 ntBASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHGA11Q9Y5H2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 snoU2_19.2-201ENST00000363024 80 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 Y_RNA.200-201ENST00000364018 102 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 Y_RNA.405-201ENST00000383979 100 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 Y_RNA.451-201ENST00000384200 100 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 RNY3P4-201ENST00000384428 101 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 Y_RNA.524-201ENST00000384564 100 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 Y_RNA.561-201ENST00000384694 100 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 MIR1282-201ENST00000408865 101 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 COX5BP7-201ENST00000414780 274 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 TMEM167AP1-201ENST00000423409 219 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 SRSF1P1-201ENST00000424058 520 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 AC091390.3-201ENST00000426478 338 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 RPL19P16-201ENST00000433839 588 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 GSTM5P1-201ENST00000434751 660 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 AC013470.1-201ENST00000453438 462 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 AC010469.2-201ENST00000496412 480 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 AL671862.1-201ENST00000515851 349 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 RNU6-1338P-201ENST00000516328 91 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 AC025755.1-201ENST00000521306 278 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 CASP1P1-201ENST00000526345 212 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 HIGD1AP5-201ENST00000529959 259 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 AC027369.5-201ENST00000533838 755 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 EDDM3DP-201ENST00000554692 434 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 MIR4300-201ENST00000581016 96 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 AC008521.2-201ENST00000591021 259 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 AP001642.1-201ENST00000624727 2117 ntBASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PCDHGA11Q9Y5H2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHGA11Q9Y5H2 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms