Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RPL7P34-201ENST00000433316 712 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 SETP8-201ENST00000435341 628 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 GAPDHP27-201ENST00000447427 1020 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 ZNF114P1-201ENST00000453500 292 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 MTCO1P42-201ENST00000457379 726 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 S100A11P2-201ENST00000467589 312 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 BZW1P2-201ENST00000473537 826 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AC117440.1-201ENST00000474107 571 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 RN7SKP272-201ENST00000516988 232 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 RNU6-232P-201ENST00000517144 64 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 NRON-201ENST00000517270 370 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AP000907.2-201ENST00000530827 353 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AP002404.1-201ENST00000532005 451 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 TRAV28-201ENST00000557548 323 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 TPMTP1-201ENST00000592307 737 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AC112187.2-201ENST00000604345 283 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AC091965.5-201ENST00000624785 342 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 OR5H6-203ENST00000642105 978 ntBASIC2.84□□□□□ -1.95
ATG4BQ9Y4P1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.84□□□□□ -1.96
ATG4BQ9Y4P1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.84□□□□□ -1.96
ATG4BQ9Y4P1 AC008669.1-201ENST00000565823 2178 ntBASIC2.84□□□□□ -1.96
ATG4BQ9Y4P1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.84□□□□□ -1.96
ATG4BQ9Y4P1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AC099654.7-201ENST00000635788 2127 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 RNU6-500P-201ENST00000362349 107 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 Y_RNA.97-201ENST00000363094 102 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 SNORA71.1-201ENST00000364523 117 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 RNU6-1027P-201ENST00000383998 107 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 RNU6-809P-201ENST00000384461 107 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 TXNP7-201ENST00000406296 293 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 RPS27AP14-201ENST00000422868 454 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AC093151.1-201ENST00000427711 313 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AL390023.1-201ENST00000428836 262 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AL512844.2-201ENST00000433990 593 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 Z82210.1-201ENST00000440037 231 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 TRIM60P18-201ENST00000441518 828 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 PIGFP3-201ENST00000441918 722 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 BMI1P1-201ENST00000445879 941 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AL031183.1-201ENST00000457667 207 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 RN7SL633P-201ENST00000488974 297 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 RPS15AP36-201ENST00000492022 382 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AC010486.2-201ENST00000505572 483 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 RN7SKP43-201ENST00000516173 320 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 RNA5SP291-201ENST00000517222 105 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AC009812.2-201ENST00000517657 457 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AC007536.1-201ENST00000533382 349 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AC005951.2-201ENST00000576282 495 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 NUTF2P8-201ENST00000604593 363 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AC004908.2-201ENST00000609090 574 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AP003485.2-201ENST00000623636 610 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AF246928.1-201ENST00000623768 87 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AC097520.1-201ENST00000624435 385 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 AC093831.2-201ENST00000624393 3427 ntBASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.83□□□□□ -1.96
ATG4BQ9Y4P1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 RNU6-501P-201ENST00000364072 100 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 RNU1-140P-201ENST00000365040 165 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 AF228730.1-201ENST00000397972 663 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 NDUFB4P4-201ENST00000404822 243 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 RNU4-72P-201ENST00000410754 173 ntBASIC2.82□□□□□ -1.96
ATG4BQ9Y4P1 RNA5SP344-201ENST00000411081 104 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms