Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC098657.3-201ENST00000620434 263 ntBASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 ZNF734P-201ENST00000419494 1534 ntBASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 AL033519.2-201ENST00000403958 392 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 RPS12P24-201ENST00000412619 387 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AC006548.1-201ENST00000427470 102 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 RPL35AP22-201ENST00000436855 335 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 MTND4LP16-201ENST00000440828 295 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 C1DP3-201ENST00000455013 423 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 snoU13.3-201ENST00000459441 104 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AC096992.1-201ENST00000459808 709 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 BZW1P2-201ENST00000473537 826 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 HMGB3P3-201ENST00000510526 400 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AC008494.2-201ENST00000514544 370 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AC022616.2-201ENST00000523185 300 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 DNAJC8P1-201ENST00000554535 372 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 CBX3P2-202ENST00000583365 535 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 CR381572.1-201ENST00000625098 102 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AL359851.1-201ENST00000569460 4997 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 RNU6-600P-201ENST00000362524 99 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 Y_RNA.295-201ENST00000364918 102 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 RNU6-1181P-201ENST00000384191 106 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AC013553.2-201ENST00000604244 589 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AC073111.2-201ENST00000605657 1075 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 AL356118.1-201ENST00000635272 1078 ntBASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.73□□□□□ -2.13
PHRF1Q9P1Y6 RNU6-670P-201ENST00000364312 104 ntBASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 snoU109.4-201ENST00000458953 143 ntBASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 FO393415.2-201ENST00000480085 343 ntBASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 MRPL42P6-201ENST00000486397 371 ntBASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 PCNAP1-201ENST00000505363 709 ntBASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 AC008837.2-201ENST00000513076 418 ntBASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 AC068135.2-201ENST00000569293 1028 ntBASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 AL009028.1-201ENST00000604895 802 ntBASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 AC138473.1-201ENST00000605717 526 ntBASIC1.72□□□□□ -2.13
PHRF1Q9P1Y6 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
PHRF1Q9P1Y6 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 AC074117.2-201ENST00000417130 397 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 MTCO3P4-201ENST00000419236 787 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 OR51AB1P-201ENST00000429046 620 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 SNRPEP4-201ENST00000435815 279 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 AL121871.1-201ENST00000443413 436 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 RPS26P56-201ENST00000444468 240 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 AC104689.1-201ENST00000473356 768 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 SYPL1P1-201ENST00000473622 768 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 AC009901.1-201ENST00000506703 541 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 AC008562.1-201ENST00000521763 330 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 AC115989.2-201ENST00000578640 563 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 AC005730.3-201ENST00000583067 366 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 U6.48-201ENST00000618523 106 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 AP003122.6-201ENST00000623831 495 ntBASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.71□□□□□ -2.14
PHRF1Q9P1Y6 RNU6-50P-201ENST00000362356 103 ntBASIC1.7□□□□□ -2.14
PHRF1Q9P1Y6 AC092447.6-201ENST00000414578 210 ntBASIC1.7□□□□□ -2.14
PHRF1Q9P1Y6 BMI1P1-201ENST00000445879 941 ntBASIC1.7□□□□□ -2.14
PHRF1Q9P1Y6 AC093801.2-201ENST00000503966 1050 ntBASIC1.7□□□□□ -2.14
PHRF1Q9P1Y6 SUMO2P6-201ENST00000505273 288 ntBASIC1.7□□□□□ -2.14
PHRF1Q9P1Y6 AC113155.1-201ENST00000511141 769 ntBASIC1.7□□□□□ -2.14
PHRF1Q9P1Y6 FABP5P5-201ENST00000515537 406 ntBASIC1.7□□□□□ -2.14
PHRF1Q9P1Y6 MTCO1P47-201ENST00000523889 1271 ntBASIC1.7□□□□□ -2.14
PHRF1Q9P1Y6 AC245036.5-201ENST00000596330 847 ntBASIC1.7□□□□□ -2.14
PHRF1Q9P1Y6 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.7□□□□□ -2.14
PHRF1Q9P1Y6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
PHRF1Q9P1Y6 AC093767.1-201ENST00000504523 156 ntBASIC1.69□□□□□ -2.14
PHRF1Q9P1Y6 ARL2BPP4-201ENST00000506854 471 ntBASIC1.69□□□□□ -2.14
PHRF1Q9P1Y6 RNU1-104P-201ENST00000517280 175 ntBASIC1.69□□□□□ -2.14
PHRF1Q9P1Y6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.69□□□□□ -2.14
PHRF1Q9P1Y6 HSPE1P3-201ENST00000559254 309 ntBASIC1.69□□□□□ -2.14
PHRF1Q9P1Y6 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.69□□□□□ -2.14
PHRF1Q9P1Y6 AL355812.1-201ENST00000603215 216 ntBASIC1.69□□□□□ -2.14
PHRF1Q9P1Y6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms