Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AL590365.1-201ENST00000450788 243 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AC017037.2-201ENST00000513850 890 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 SNORA9.3-201ENST00000516383 129 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 MTND4LP18-201ENST00000526864 291 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 EEF1B2P4-201ENST00000551398 348 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 EIF4BP1-201ENST00000554881 351 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 MIR3690-201ENST00000580266 75 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AC090425.2-201ENST00000608818 501 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AC098679.4-201ENST00000624241 654 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AC079597.1-201ENST00000624306 508 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 MTND5P33-201ENST00000571250 1450 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC108206.1-201ENST00000570186 4159 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 RNA5SP258-201ENST00000362750 119 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 RNU1-112P-201ENST00000364401 164 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 RNU6-533P-201ENST00000384144 107 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 RNU6-1119P-201ENST00000384349 108 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AL590004.2-201ENST00000404787 371 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 RPL17P12-201ENST00000413391 526 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 BMS1P22-201ENST00000414726 313 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 RPS24P13-201ENST00000442520 397 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 Z82190.1-201ENST00000454534 490 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC104308.1-201ENST00000454621 333 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 CEACAMP4-201ENST00000457676 421 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC093331.1-201ENST00000521474 169 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC006504.3-201ENST00000586818 523 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 XIAPP1-201ENST00000603162 600 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC112187.2-201ENST00000604345 283 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC012531.5-201ENST00000611375 151 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC099842.1-201ENST00000619919 596 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC006386.2-201ENST00000624491 75 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC012005.1-201ENST00000624575 75 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 AC099654.13-201ENST00000639774 207 ntBASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ECHDC1Q9NTX5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AL161781.1-201ENST00000354277 403 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 Y_RNA.41-201ENST00000362646 102 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 Y_RNA.46-201ENST00000362695 102 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 RNU6-623P-201ENST00000363143 105 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 SNORD6-201ENST00000365444 73 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 RNU6-821P-201ENST00000390995 107 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 RNU6-248P-201ENST00000410720 107 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 COTL1P1-201ENST00000422309 375 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 RPL21P112-201ENST00000434403 463 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AC112220.1-201ENST00000434628 355 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 SETP5-201ENST00000437270 562 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AC105272.1-201ENST00000438604 198 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 PGBD4P3-201ENST00000440731 581 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 ARL2BPP4-201ENST00000506854 471 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AC006390.1-201ENST00000508068 283 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 RN7SKP132-201ENST00000516001 208 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AC090136.1-201ENST00000520009 240 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AP004371.1-201ENST00000525240 214 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AP003181.2-201ENST00000528941 181 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 ZNF192P1-203ENST00000565888 810 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 MIR4528-201ENST00000577763 90 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 MIR5047-201ENST00000579212 100 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AC108747.1-201ENST00000609508 535 ntBASIC3.35□□□□□ -1.87
ECHDC1Q9NTX5 AL355472.4-201ENST00000610233 626 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms