Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 BDP1P-201ENST00000582658 1990 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AC008568.2-201ENST00000623862 2313 ntBASIC4.34□□□□□ -1.72
RTFDC1Q9BY42 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.72
RTFDC1Q9BY42 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AC027514.1-201ENST00000588561 1603 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 RNU6-960P-201ENST00000364056 120 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 RNU5E-6P-201ENST00000365574 115 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 RNU6-456P-201ENST00000384493 107 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 MIR558-201ENST00000384920 94 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 MIR181A1-201ENST00000385026 110 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AL122016.1-201ENST00000403365 367 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AL138878.1-201ENST00000405131 347 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 RNU4-55P-201ENST00000410731 137 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 JKAMPP1-201ENST00000413804 919 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 HMGB3P20-201ENST00000417997 600 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AC002486.1-201ENST00000435098 391 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 NANOGNBP1-201ENST00000448444 480 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AC023598.1-201ENST00000472521 361 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 RPL21P13-201ENST00000488305 481 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AP001086.1-201ENST00000494882 321 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 ARL2BPP6-201ENST00000512757 439 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 RNU6-579P-201ENST00000516879 102 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 IGKV2-26-201ENST00000518305 343 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 ATP5F1P5-201ENST00000526403 760 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AP003034.1-201ENST00000534621 422 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AC098848.2-201ENST00000588023 330 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 GLUD1P4-201ENST00000590914 418 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AP002360.4-201ENST00000606980 481 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AL158209.2-201ENST00000619266 216 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AP003355.3-201ENST00000623465 114 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 AC009161.2-201ENST00000624626 138 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 LRRC77P-213ENST00000637727 880 ntBASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTFDC1Q9BY42 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 MTND4P5-201ENST00000435821 1374 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AC090740.1-201ENST00000623193 2262 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 MIR514A1-201ENST00000385133 98 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 Y_RNA.619-201ENST00000410951 90 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 NDUFB4P7-201ENST00000423198 363 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 MTCO2P11-201ENST00000431069 680 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 SNRPGP6-201ENST00000451124 220 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 SUB1P2-201ENST00000556401 297 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AC136619.2-201ENST00000563361 631 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 MIR4325-201ENST00000583049 90 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AC007684.1-201ENST00000609671 477 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 U4.6-201ENST00000621618 127 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AC091905.1-201ENST00000624400 311 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AC124864.2-201ENST00000624736 186 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 SCARNA15.3-201ENST00000626315 122 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 SCARNA4.1-201ENST00000628597 123 ntBASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.32□□□□□ -1.72
RTFDC1Q9BY42 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 Y_RNA.1-201ENST00000352915 104 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AL513331.1-201ENST00000411908 397 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 FCF1P9-201ENST00000412546 282 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AC017079.2-201ENST00000416102 485 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 MTCO1P21-201ENST00000416634 589 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 ZNF90P2-204ENST00000419323 1075 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AC020550.1-201ENST00000447385 163 ntBASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.31□□□□□ -1.72
RTFDC1Q9BY42 RPL37P6-201ENST00000460682 294 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms