Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC244453.4-201ENST00000419150 388 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC246680.2-201ENST00000422106 389 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC027124.2-201ENST00000428249 105 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC244035.1-201ENST00000430042 390 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AL050321.1-201ENST00000432363 400 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 MTND2P29-201ENST00000438595 412 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC000041.1-201ENST00000439655 175 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 FO393415.2-201ENST00000480085 343 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 LARP1BP2-201ENST00000486594 519 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AL358832.1-201ENST00000497800 389 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC093767.1-201ENST00000504523 156 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC098862.1-201ENST00000504991 413 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 FAM206BP-201ENST00000510179 541 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AL138963.2-201ENST00000605137 226 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 PRR13P7-201ENST00000605538 430 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 OR2AS2P-201ENST00000606902 342 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC068831.8-201ENST00000620171 435 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC012150.2-201ENST00000621300 544 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC008443.7-201ENST00000622195 246 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 MTND5P10-201ENST00000603719 1809 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC010889.1-201ENST00000566193 2666 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
VPS25Q9BRG1 MIR135A2-201ENST00000384854 100 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 Z86062.1-201ENST00000406773 777 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AC233981.1-201ENST00000423224 461 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AC092017.2-201ENST00000427600 362 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AC092393.1-201ENST00000439625 742 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 Z82210.1-201ENST00000440037 231 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AC009238.1-201ENST00000442165 424 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AC009237.6-201ENST00000446969 424 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 RSL24D1P3-201ENST00000449255 495 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS25Q9BRG1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS25Q9BRG1 RPS20P22-201ENST00000473700 357 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 RN7SL636P-201ENST00000497504 294 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS25Q9BRG1 RNA5SP200-201ENST00000516360 103 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 SCARNA15.2-201ENST00000516409 127 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS25Q9BRG1 EEF1A1P37-201ENST00000522748 715 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS25Q9BRG1 RANP3-201ENST00000530970 276 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AC124947.2-202ENST00000552735 133 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS25Q9BRG1 MIR4419B-201ENST00000577260 68 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 SNORD39.3-201ENST00000584451 71 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS25Q9BRG1 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AL391813.1-201ENST00000603098 260 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AC093732.2-201ENST00000607950 274 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AL121652.1-201ENST00000608851 448 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AC022202.1-201ENST00000613515 211 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 MIR6130-201ENST00000619419 109 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 AL590396.2-201ENST00000636511 1041 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 Z99571.1-201ENST00000636677 394 ntBASIC1.23□□□□□ -2.21
VPS25Q9BRG1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS25Q9BRG1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
VPS25Q9BRG1 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AC016717.2-201ENST00000609089 5141 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AL024474.1-201ENST00000404655 591 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 NDUFB4P4-201ENST00000404822 243 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 RPL30P13-201ENST00000418873 348 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 PNRC2P1-201ENST00000423940 420 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AL512637.2-201ENST00000431287 1256 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AL118520.1-201ENST00000450770 291 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 MRPS33P3-201ENST00000513456 322 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 DUXAP1-201ENST00000556632 463 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS25Q9BRG1 ELOCP29-201ENST00000588193 334 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 MTND4LP5-201ENST00000605152 292 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 AL109618.2-201ENST00000605527 211 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 MIR6748-201ENST00000610433 71 ntBASIC1.22□□□□□ -2.21
VPS25Q9BRG1 MIR7974-201ENST00000615835 79 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms