Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC138915.1-201ENST00000565427 1685 ntBASIC0.92□□□□□ -2.26
SPENQ96T58 RNU6-1320P-201ENST00000390838 107 ntBASIC0.92□□□□□ -2.26
SPENQ96T58 RNU6-1269P-201ENST00000391139 107 ntBASIC0.92□□□□□ -2.26
SPENQ96T58 USP9YP33-201ENST00000412220 421 ntBASIC0.92□□□□□ -2.26
SPENQ96T58 USP9YP35-201ENST00000435696 412 ntBASIC0.92□□□□□ -2.26
SPENQ96T58 IPO7P1-201ENST00000442031 636 ntBASIC0.92□□□□□ -2.26
SPENQ96T58 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.92□□□□□ -2.26
SPENQ96T58 RNU6-599P-201ENST00000459383 107 ntBASIC0.92□□□□□ -2.26
SPENQ96T58 RNU6-1193P-201ENST00000459461 107 ntBASIC0.92□□□□□ -2.26
SPENQ96T58 AC093852.1-201ENST00000503587 266 ntBASIC0.92□□□□□ -2.26
SPENQ96T58 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.92□□□□□ -2.26
SPENQ96T58 RNU6-368P-201ENST00000620928 107 ntBASIC0.92□□□□□ -2.26
SPENQ96T58 RNU6-538P-201ENST00000622329 107 ntBASIC0.92□□□□□ -2.26
SPENQ96T58 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.92□□□□□ -2.26
SPENQ96T58 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
SPENQ96T58 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.91□□□□□ -2.26
SPENQ96T58 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.91□□□□□ -2.26
SPENQ96T58 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC0.91□□□□□ -2.26
SPENQ96T58 AL121601.2-201ENST00000438019 707 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.91□□□□□ -2.26
SPENQ96T58 AP003497.1-201ENST00000528472 562 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.91□□□□□ -2.26
SPENQ96T58 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
SPENQ96T58 RNU6-666P-201ENST00000363499 107 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 SNORD56.5-201ENST00000364281 72 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 RNU11-5P-201ENST00000391216 129 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.91□□□□□ -2.26
SPENQ96T58 SEM1P1-201ENST00000506694 209 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 RPL37P25-201ENST00000507308 276 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 AC093281.2-201ENST00000510153 597 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 MTCO1P40-201ENST00000574371 625 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 MIR1285-1-201ENST00000408593 84 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.91□□□□□ -2.26
SPENQ96T58 SNX5P1-201ENST00000505757 1041 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 AC084757.1-201ENST00000559987 490 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 AC011468.4-201ENST00000603942 409 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 AC005156.1-201ENST00000613371 573 ntBASIC0.91□□□□□ -2.26
SPENQ96T58 RNU6-603P-201ENST00000411403 107 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 RPL30P4-201ENST00000429309 333 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 AC000111.3-201ENST00000433478 193 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 AL591212.2-201ENST00000433923 257 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.9□□□□□ -2.27
SPENQ96T58 SNORA31.16-201ENST00000516773 139 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 AP005597.4-201ENST00000526762 229 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.9□□□□□ -2.27
SPENQ96T58 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.9□□□□□ -2.27
SPENQ96T58 RLIMP2-201ENST00000427891 1563 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 NUP35P2-201ENST00000416748 943 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.9□□□□□ -2.27
SPENQ96T58 PGBD4P6-201ENST00000421501 610 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 MORF4L1P7-201ENST00000426038 703 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.9□□□□□ -2.27
SPENQ96T58 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.9□□□□□ -2.27
SPENQ96T58 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 MIR4278-201ENST00000636094 69 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 AC130650.2-201ENST00000618736 2403 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SPENQ96T58 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 RNU6-56P-201ENST00000516986 93 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 CYCSP23-201ENST00000519781 313 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC0.9□□□□□ -2.27
SPENQ96T58 ACTR3BP3-201ENST00000565577 979 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC0.9□□□□□ -2.27
SPENQ96T58 MIR924-201ENST00000638017 53 ntBASIC0.9□□□□□ -2.27
SPENQ96T58 AC011155.1-201ENST00000316512 456 ntBASIC0.89□□□□□ -2.27
SPENQ96T58 PTP4A1P1-201ENST00000420539 515 ntBASIC0.89□□□□□ -2.27
SPENQ96T58 UBE2V2P1-201ENST00000434717 398 ntBASIC0.89□□□□□ -2.27
SPENQ96T58 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.89□□□□□ -2.27
SPENQ96T58 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.89□□□□□ -2.27
SPENQ96T58 RPS29P23-201ENST00000458635 123 ntBASIC0.89□□□□□ -2.27
SPENQ96T58 ANP32BP3-201ENST00000559213 706 ntBASIC0.89□□□□□ -2.27
SPENQ96T58 AC104229.1-201ENST00000561364 255 ntBASIC0.89□□□□□ -2.27
SPENQ96T58 AC087588.2-201ENST00000617667 426 ntBASIC0.89□□□□□ -2.27
SPENQ96T58 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
SPENQ96T58 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
SPENQ96T58 AC099336.2-201ENST00000422457 254 ntBASIC0.89□□□□□ -2.27
SPENQ96T58 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.89□□□□□ -2.27
SPENQ96T58 PSPHP1-201ENST00000450062 261 ntBASIC0.89□□□□□ -2.27
SPENQ96T58 RPL7P18-201ENST00000478965 734 ntBASIC0.89□□□□□ -2.27
SPENQ96T58 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.89□□□□□ -2.27
SPENQ96T58 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC0.89□□□□□ -2.27
SPENQ96T58 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.89□□□□□ -2.27
SPENQ96T58 AC108706.1-201ENST00000611053 297 ntBASIC0.89□□□□□ -2.27
SPENQ96T58 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
SPENQ96T58 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.88□□□□□ -2.27
SPENQ96T58 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.88□□□□□ -2.27
SPENQ96T58 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.88□□□□□ -2.27
SPENQ96T58 MIR514B-201ENST00000516774 80 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 RNA5SP364-201ENST00000516938 78 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 AC000123.2-201ENST00000623124 461 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 AC103710.2-202ENST00000641454 2853 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 Y_RNA.280-201ENST00000364765 112 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 MIR936-201ENST00000401264 98 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 AC009302.1-201ENST00000417147 390 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 MTND2P9-201ENST00000422293 931 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 AC244035.1-201ENST00000430042 390 ntBASIC0.88□□□□□ -2.27
SPENQ96T58 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.88□□□□□ -2.27
SPENQ96T58 AC239798.3-201ENST00000454459 408 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms