Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.65□□□□□ -1.66
SHDQ96IW2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
SHDQ96IW2 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHDQ96IW2 SPRR2C-201ENST00000290702 219 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 MIR383-201ENST00000362257 73 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 RNU6-371P-201ENST00000364283 108 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 SNORA62.3-201ENST00000365110 153 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 SNORD116-29-201ENST00000384516 83 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 PPIAP31-201ENST00000405422 495 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 RNU4-14P-201ENST00000410858 122 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.65□□□□□ -1.67
SHDQ96IW2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.65□□□□□ -1.67
SHDQ96IW2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.65□□□□□ -1.67
SHDQ96IW2 AC006946.1-201ENST00000429106 328 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 AL592045.1-201ENST00000429867 352 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.65□□□□□ -1.67
SHDQ96IW2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHDQ96IW2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.65□□□□□ -1.67
SHDQ96IW2 AP000926.1-201ENST00000479573 241 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 AC027575.1-201ENST00000481064 460 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 AC078918.1-201ENST00000498515 228 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 HMGB3P15-201ENST00000507326 574 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
SHDQ96IW2 AC023141.12-201ENST00000512399 199 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 RNU6-1332P-201ENST00000516666 104 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.65□□□□□ -1.67
SHDQ96IW2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.65□□□□□ -1.67
SHDQ96IW2 AC233702.9-201ENST00000581528 203 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 AC006130.2-201ENST00000586202 326 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.65□□□□□ -1.67
SHDQ96IW2 AC005255.1-201ENST00000593748 216 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.65□□□□□ -1.67
SHDQ96IW2 AC098826.3-201ENST00000603823 466 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 FAM157A-202ENST00000615155 405 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 Z99571.1-201ENST00000636677 394 ntBASIC4.65□□□□□ -1.67
SHDQ96IW2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.65□□□□□ -1.67
SHDQ96IW2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SHDQ96IW2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHDQ96IW2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SHDQ96IW2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.65□□□□□ -1.67
SHDQ96IW2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SHDQ96IW2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SHDQ96IW2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SHDQ96IW2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHDQ96IW2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHDQ96IW2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SHDQ96IW2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHDQ96IW2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHDQ96IW2 Y_RNA.146-201ENST00000363549 102 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 RNU6-601P-201ENST00000384540 107 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 MIR554-201ENST00000384874 96 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 AP000580.1-201ENST00000404439 358 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 MIR548P-201ENST00000408336 84 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.64□□□□□ -1.67
SHDQ96IW2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.64□□□□□ -1.67
SHDQ96IW2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.64□□□□□ -1.67
SHDQ96IW2 AL132765.1-201ENST00000434165 553 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 AC073063.1-201ENST00000434352 607 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 Y_RNA.653-201ENST00000459091 95 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 AC117503.1-201ENST00000472241 394 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.64□□□□□ -1.67
SHDQ96IW2 AL160314.1-201ENST00000490836 438 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 HMGB1P30-201ENST00000492455 606 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 AC078817.1-201ENST00000492623 435 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.64□□□□□ -1.67
SHDQ96IW2 RNU6-1256P-201ENST00000516539 103 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 AC105031.1-201ENST00000518550 476 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.64□□□□□ -1.67
SHDQ96IW2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHDQ96IW2 AC022432.1-201ENST00000595739 310 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 AL355365.1-201ENST00000616480 294 ntBASIC4.64□□□□□ -1.67
SHDQ96IW2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.64□□□□□ -1.67
SHDQ96IW2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.64□□□□□ -1.67
SHDQ96IW2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHDQ96IW2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHDQ96IW2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHDQ96IW2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHDQ96IW2 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SHDQ96IW2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHDQ96IW2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SHDQ96IW2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHDQ96IW2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.63□□□□□ -1.67
SHDQ96IW2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHDQ96IW2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHDQ96IW2 RN7SKP44-201ENST00000363602 316 ntBASIC4.63□□□□□ -1.67
SHDQ96IW2 RNU6-266P-201ENST00000364225 107 ntBASIC4.63□□□□□ -1.67
SHDQ96IW2 RNU6-512P-201ENST00000364438 103 ntBASIC4.63□□□□□ -1.67
SHDQ96IW2 SNORA4.3-201ENST00000365564 137 ntBASIC4.63□□□□□ -1.67
SHDQ96IW2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHDQ96IW2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHDQ96IW2 MIR659-201ENST00000384963 97 ntBASIC4.63□□□□□ -1.67
SHDQ96IW2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHDQ96IW2 AL139397.2-201ENST00000404529 772 ntBASIC4.63□□□□□ -1.67
SHDQ96IW2 NDUFB4P7-201ENST00000423198 363 ntBASIC4.63□□□□□ -1.67
SHDQ96IW2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.63□□□□□ -1.67
SHDQ96IW2 AL359672.1-201ENST00000442302 409 ntBASIC4.63□□□□□ -1.67
SHDQ96IW2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.63□□□□□ -1.67
SHDQ96IW2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.63□□□□□ -1.67
SHDQ96IW2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.63□□□□□ -1.67
SHDQ96IW2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms