Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AL513302.2-201ENST00000562313 1842 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SKA1Q96BD8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SKA1Q96BD8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SKA1Q96BD8 RNU1-33P-201ENST00000364249 162 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 MIR767-201ENST00000390228 109 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 MIR1289-1-201ENST00000408836 144 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 RAC1P6-201ENST00000423911 575 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 AC092447.3-201ENST00000426027 686 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 AL365496.1-201ENST00000426885 215 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 RPL7P34-201ENST00000433316 712 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 RPL12P25-201ENST00000455592 494 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 RPS27P29-201ENST00000463110 252 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 RPS4XP22-201ENST00000480755 780 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 AC011979.2-201ENST00000527568 352 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 DUXAP5-201ENST00000529668 529 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 AC128657.1-201ENST00000549459 145 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 AL391261.3-201ENST00000557194 520 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 MIR5697-201ENST00000578045 78 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 DUXAP4-201ENST00000603046 613 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.55□□□□□ -1.84
SKA1Q96BD8 AC012360.2-201ENST00000609349 391 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 AC107294.1-201ENST00000609524 467 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 BX664608.1-201ENST00000610519 487 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 AP003485.2-201ENST00000623636 610 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 AC068057.2-201ENST00000624047 895 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 PWAR6-201ENST00000552334 4618 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 MTND5P27-201ENST00000428871 1720 ntBASIC3.55□□□□□ -1.84
SKA1Q96BD8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SKA1Q96BD8 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SKA1Q96BD8 AL359693.1-201ENST00000614959 2407 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SKA1Q96BD8 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
SKA1Q96BD8 RNY4P16-201ENST00000364768 94 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 RNU5E-5P-201ENST00000365379 116 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SKA1Q96BD8 RNA5SP293-201ENST00000410527 113 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 Y_RNA.608-201ENST00000410647 95 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.54□□□□□ -1.84
SKA1Q96BD8 Z92545.1-201ENST00000411782 234 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.54□□□□□ -1.84
SKA1Q96BD8 AC019097.1-201ENST00000424783 735 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 AC104651.1-201ENST00000427559 735 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 ELOCP14-201ENST00000428070 331 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 SNRPEP9-201ENST00000436794 238 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 ELOCP7-201ENST00000439968 331 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 KATNBL1P6-201ENST00000453433 915 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 AC091179.1-201ENST00000461606 579 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 RPL7P5-201ENST00000471472 736 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.54□□□□□ -1.84
SKA1Q96BD8 RBM43P1-201ENST00000476891 1081 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 HSPD1P15-201ENST00000505573 1122 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 AC114786.4-201ENST00000508771 728 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 MIR2276-201ENST00000516886 89 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
SKA1Q96BD8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.54□□□□□ -1.84
SKA1Q96BD8 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.54□□□□□ -1.84
SKA1Q96BD8 RPS3AP4-201ENST00000555161 764 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 MIR3200-201ENST00000580767 85 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 AL022161.1-201ENST00000604390 213 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 AL391813.2-201ENST00000609113 322 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SKA1Q96BD8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.54□□□□□ -1.84
SKA1Q96BD8 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.54□□□□□ -1.84
SKA1Q96BD8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SKA1Q96BD8 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.53□□□□□ -1.84
SKA1Q96BD8 OR1S2-201ENST00000302592 978 ntBASIC3.53□□□□□ -1.84
SKA1Q96BD8 MIR634-201ENST00000385208 97 ntBASIC3.53□□□□□ -1.84
SKA1Q96BD8 MRPL42P2-201ENST00000403169 426 ntBASIC3.53□□□□□ -1.84
SKA1Q96BD8 U3.39-201ENST00000408569 239 ntBASIC3.53□□□□□ -1.84
SKA1Q96BD8 RNA5SP120-201ENST00000410900 112 ntBASIC3.53□□□□□ -1.84
SKA1Q96BD8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.53□□□□□ -1.84
SKA1Q96BD8 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.53□□□□□ -1.84
SKA1Q96BD8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.53□□□□□ -1.84
SKA1Q96BD8 HMGN2P30-201ENST00000423237 256 ntBASIC3.53□□□□□ -1.84
SKA1Q96BD8 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.53□□□□□ -1.84
SKA1Q96BD8 AC010153.1-201ENST00000432862 727 ntBASIC3.53□□□□□ -1.84
SKA1Q96BD8 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.53□□□□□ -1.84
SKA1Q96BD8 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.53□□□□□ -1.84
SKA1Q96BD8 RPL23AP58-201ENST00000440453 469 ntBASIC3.53□□□□□ -1.84
SKA1Q96BD8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms