Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC016957.1-201ENST00000534895 309 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 RPL21P12-201ENST00000559810 515 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 RPL23AP84-201ENST00000571193 464 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 BDH2P1-201ENST00000602288 736 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC007687.1-201ENST00000602704 304 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC006077.1-201ENST00000604746 343 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AP002826.1-201ENST00000608835 315 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC096577.2-201ENST00000611455 153 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC004696.1-201ENST00000614345 607 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 SDR42E1P2-201ENST00000614861 481 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC010133.1-201ENST00000615809 842 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AL158209.2-201ENST00000619266 216 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC026585.1-201ENST00000619582 524 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 U4.6-201ENST00000621618 127 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC110801.1-201ENST00000623590 212 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC124864.2-201ENST00000624736 186 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 RNU6-1097P-201ENST00000363586 107 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 RNU6-282P-201ENST00000365357 103 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 RNU6-108P-201ENST00000365558 107 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 MIR1290-201ENST00000408735 78 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 RNA5SP129-201ENST00000410276 118 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 RNU2-37P-201ENST00000410695 177 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AC018630.2-202ENST00000422992 927 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 RPL27AP8-201ENST00000424277 446 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 GPR143P-201ENST00000434155 205 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AC025518.1-201ENST00000479856 347 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AL359273.1-201ENST00000510918 627 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 RNA5SP309-201ENST00000516670 106 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 RNA5SP468-201ENST00000516782 93 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AC090572.1-201ENST00000519251 160 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 ARL2BPP2-201ENST00000550907 489 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 GLUD1P4-201ENST00000590914 418 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AL161756.2-201ENST00000604597 246 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AL136363.1-201ENST00000605349 337 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AC068792.1-201ENST00000621354 417 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BEST3Q8N1M1 AC027514.1-201ENST00000588561 1603 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 RIOK3P1-201ENST00000418778 1528 ntBASIC3.28□□□□□ -1.88
BEST3Q8N1M1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC007656.2-201ENST00000624902 4547 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 MTND5P1-201ENST00000445440 1375 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 RNU5E-6P-201ENST00000365574 115 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 MIR23A-201ENST00000385245 73 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 PTMAP5-201ENST00000393073 333 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 HSPE1P26-201ENST00000405341 275 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 MTHFD2P2-201ENST00000407725 247 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 RNU2-36P-201ENST00000410361 191 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC009237.5-201ENST00000414271 501 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 RPL7L1P10-201ENST00000427790 463 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 OR2AS1P-201ENST00000427827 319 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 TIMM9P3-201ENST00000428659 274 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC097713.2-201ENST00000430199 356 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 ATP5JP1-201ENST00000431631 322 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AC002486.1-201ENST00000435098 391 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AL451074.3-201ENST00000437709 472 ntBASIC3.27□□□□□ -1.89
BEST3Q8N1M1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.27□□□□□ -1.89
BEST3Q8N1M1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms