Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MIR1284-201ENST00000408337 120 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 RNA5SP181-201ENST00000410246 98 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AL354692.1-201ENST00000423044 315 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AC234781.2-201ENST00000426370 994 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AC092573.2-201ENST00000434546 243 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 EEF1E1P1-201ENST00000446998 430 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AL049714.1-201ENST00000466686 347 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 RPL36AP51-201ENST00000487216 318 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 HMGB1P36-201ENST00000487709 576 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AL359273.1-201ENST00000510918 627 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 RNU6-150P-201ENST00000516237 95 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 IGLV3-17-201ENST00000519099 244 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 RPL7P20-201ENST00000520308 745 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 OR6C7P-201ENST00000547875 934 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AL132857.1-201ENST00000555180 708 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AC061975.8-201ENST00000587058 721 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AL158211.4-201ENST00000606988 584 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AC116618.1-201ENST00000634617 774 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AC099654.9-201ENST00000637055 678 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 AC008669.1-201ENST00000565823 2178 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AC069528.2-201ENST00000624849 1991 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 FTLP6-201ENST00000355274 422 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 CCDC58P2-201ENST00000417131 366 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 MTCYBP38-201ENST00000417160 1123 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 NDUFB4P7-201ENST00000423198 363 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 TMEM167AP1-201ENST00000423409 219 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 ZYG11AP1-201ENST00000430329 837 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 OR4K11P-201ENST00000431829 904 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 HSFY7P-201ENST00000432672 318 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 HSFY8P-201ENST00000437934 318 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AL592447.1-201ENST00000447592 540 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AL009048.1-201ENST00000450437 298 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 SNRPGP6-201ENST00000451124 220 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 HSFY5P-201ENST00000453726 309 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AL135752.1-201ENST00000479477 471 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 OR5BM1P-201ENST00000512021 366 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 TTC39CP1-201ENST00000512513 755 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 MTATP6P9-201ENST00000515039 680 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 RNA5SP402-201ENST00000517148 110 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AP000867.2-201ENST00000532468 320 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AC121758.2-201ENST00000553271 193 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AC234778.2-201ENST00000566241 354 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AC013553.2-201ENST00000604244 589 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AC006270.3-201ENST00000605967 1036 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AC067747.1-201ENST00000608026 250 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AC004067.1-201ENST00000608733 700 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 MIR1291-201ENST00000627649 87 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 AC016717.2-201ENST00000609089 5141 ntBASIC2.67□□□□□ -1.98
CCDC65Q8IXS2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 RNU6-777P-201ENST00000364265 104 ntBASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 RNU4-68P-201ENST00000364314 141 ntBASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 SNORD114-30-201ENST00000364448 72 ntBASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 MTCO2P23-201ENST00000425216 680 ntBASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 AL121871.1-201ENST00000443413 436 ntBASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 AC119751.4-201ENST00000507498 357 ntBASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 AC116353.3-201ENST00000511215 249 ntBASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 MIR4509-3-201ENST00000578671 94 ntBASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 MIR3162-201ENST00000581818 82 ntBASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 MIR4509-2-201ENST00000583920 94 ntBASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 NRBF2P5-201ENST00000603087 788 ntBASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 AC106052.1-201ENST00000608029 497 ntBASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 MIR4509-1-201ENST00000618224 94 ntBASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CCDC65Q8IXS2 AC010680.1-201ENST00000590024 3590 ntBASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms