Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC068714.1-201ENST00000559623 800 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 MIR5194-201ENST00000582634 120 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AC090970.3-201ENST00000612566 866 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AC121761.2-201ENST00000617300 689 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AC022513.1-201ENST00000624512 117 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 Y_RNA.68-201ENST00000362881 102 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 RFESDP1-201ENST00000422350 461 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 EZH2P1-201ENST00000431167 291 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AC010683.1-201ENST00000473673 378 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 OR5H4P-201ENST00000510851 923 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AC087808.1-201ENST00000520501 361 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 DUXAP3-201ENST00000603616 594 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 CR382285.2-201ENST00000624662 1495 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 RNA5SP62-201ENST00000363457 110 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 CR848007.2-201ENST00000424918 787 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AC008127.2-201ENST00000549925 1075 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 U73023.1-201ENST00000603134 700 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AL135786.2-201ENST00000608422 615 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AC006249.1-201ENST00000621223 471 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 AL031601.2-202ENST00000622650 282 ntBASIC0.71□□□□□ -2.3
VPS13BQ7Z7G8 RNU11-5P-201ENST00000391216 129 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AL355497.1-201ENST00000406262 551 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AC244636.1-201ENST00000421152 228 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 MTATP6P4-201ENST00000427725 675 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 CBX3P6-201ENST00000430257 527 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 FO393415.2-201ENST00000480085 343 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 DEFB108E-201ENST00000524692 240 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AC106052.1-201ENST00000608029 497 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AC097655.1-201ENST00000635075 318 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AC083806.3-201ENST00000614016 455 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 FTH1P12-201ENST00000432137 551 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 ARL5AP3-201ENST00000439327 386 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AL445687.1-201ENST00000439946 251 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AL500527.1-201ENST00000448532 255 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 RNU6-1132P-201ENST00000459214 107 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 RPS23P4-201ENST00000487908 423 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 CR383656.8-201ENST00000549046 145 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AL512605.2-201ENST00000592972 256 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AL136363.1-201ENST00000605349 337 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AC097468.3-201ENST00000607956 456 ntBASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.7□□□□□ -2.3
VPS13BQ7Z7G8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 Y_RNA.258-201ENST00000364613 105 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 MIR513A1-201ENST00000385138 129 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 AL030996.1-201ENST00000411430 235 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 AC234064.1-201ENST00000436312 247 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 RPL31P58-201ENST00000469001 379 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 KATNBL1P4-201ENST00000503545 918 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 HMGB3P17-201ENST00000504195 649 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 OR5BM1P-201ENST00000512021 366 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 AC103833.1-201ENST00000517442 172 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 RNA5SP257-201ENST00000363023 116 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 RNU6-997P-201ENST00000384725 107 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 AC096533.1-201ENST00000411645 353 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 SNRPEP4-201ENST00000435815 279 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 HMGN2P21-201ENST00000447764 270 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 MTND3P24-201ENST00000506306 329 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 AP001180.3-201ENST00000582221 145 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 AC112503.2-201ENST00000609005 552 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 SNORA46.1-201ENST00000391069 153 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 GPM6BP3-201ENST00000442797 145 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 AC069277.2-201ENST00000454211 432 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 AC090096.1-201ENST00000489168 390 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 AC092451.2-201ENST00000538746 658 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 ANP32BP3-201ENST00000559213 706 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 AL162373.1-201ENST00000620433 407 ntBASIC0.69□□□□□ -2.3
VPS13BQ7Z7G8 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
VPS13BQ7Z7G8 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
VPS13BQ7Z7G8 MIR193B-201ENST00000384907 83 ntBASIC0.68□□□□□ -2.3
VPS13BQ7Z7G8 MIR150-201ENST00000385048 84 ntBASIC0.68□□□□□ -2.3
VPS13BQ7Z7G8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.68□□□□□ -2.3
VPS13BQ7Z7G8 UBE2V1P13-201ENST00000436983 439 ntBASIC0.68□□□□□ -2.3
VPS13BQ7Z7G8 NEFMP1-201ENST00000443423 1006 ntBASIC0.68□□□□□ -2.3
VPS13BQ7Z7G8 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms