Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
VPS13CQ709C8 Z82195.2-201ENST00000612348 18351 ntBASIC0.79□□□□□ -2.28
VPS13CQ709C8 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
VPS13CQ709C8 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS13CQ709C8 AC244035.1-201ENST00000430042 390 ntBASIC0.79□□□□□ -2.28
VPS13CQ709C8 AC096751.1-202ENST00000502691 1067 ntBASIC0.79□□□□□ -2.28
VPS13CQ709C8 MIR514B-201ENST00000516774 80 ntBASIC0.79□□□□□ -2.28
VPS13CQ709C8 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS13CQ709C8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.79□□□□□ -2.28
VPS13CQ709C8 AC000111.3-201ENST00000433478 193 ntBASIC0.79□□□□□ -2.28
VPS13CQ709C8 AL136380.1-201ENST00000447970 162 ntBASIC0.79□□□□□ -2.28
VPS13CQ709C8 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS13CQ709C8 AP000926.1-201ENST00000479573 241 ntBASIC0.79□□□□□ -2.28
VPS13CQ709C8 ACTR3BP3-201ENST00000565577 979 ntBASIC0.79□□□□□ -2.28
VPS13CQ709C8 AC138473.1-201ENST00000605717 526 ntBASIC0.79□□□□□ -2.28
VPS13CQ709C8 AC004808.1-201ENST00000627671 721 ntBASIC0.79□□□□□ -2.28
VPS13CQ709C8 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VPS13CQ709C8 RNA5SP193-201ENST00000410353 107 ntBASIC0.78□□□□□ -2.28
VPS13CQ709C8 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC0.78□□□□□ -2.28
VPS13CQ709C8 MORF4L1P7-201ENST00000426038 703 ntBASIC0.78□□□□□ -2.28
VPS13CQ709C8 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.78□□□□□ -2.28
VPS13CQ709C8 AC090096.1-201ENST00000489168 390 ntBASIC0.78□□□□□ -2.28
VPS13CQ709C8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
VPS13CQ709C8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.78□□□□□ -2.28
VPS13CQ709C8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS13CQ709C8 MIR936-201ENST00000401264 98 ntBASIC0.78□□□□□ -2.28
VPS13CQ709C8 AC099548.1-201ENST00000421443 426 ntBASIC0.78□□□□□ -2.28
VPS13CQ709C8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.78□□□□□ -2.28
VPS13CQ709C8 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.78□□□□□ -2.28
VPS13CQ709C8 SNORD114-21-201ENST00000606412 72 ntBASIC0.78□□□□□ -2.28
VPS13CQ709C8 Z69720.2-201ENST00000624755 279 ntBASIC0.78□□□□□ -2.28
VPS13CQ709C8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC0.78□□□□□ -2.28
VPS13CQ709C8 SNORD14B-201ENST00000364533 90 ntBASIC0.78□□□□□ -2.29
VPS13CQ709C8 PGBD4P6-201ENST00000421501 610 ntBASIC0.78□□□□□ -2.29
VPS13CQ709C8 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC0.78□□□□□ -2.29
VPS13CQ709C8 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.78□□□□□ -2.29
VPS13CQ709C8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC0.78□□□□□ -2.29
VPS13CQ709C8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.29
VPS13CQ709C8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 RNA5SP310-201ENST00000459084 116 ntBASIC0.77□□□□□ -2.29
VPS13CQ709C8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 MRPS33P3-201ENST00000513456 322 ntBASIC0.77□□□□□ -2.29
VPS13CQ709C8 RNA5SP364-201ENST00000516938 78 ntBASIC0.77□□□□□ -2.29
VPS13CQ709C8 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 AL121871.1-201ENST00000443413 436 ntBASIC0.77□□□□□ -2.29
VPS13CQ709C8 AC022431.1-201ENST00000450941 438 ntBASIC0.77□□□□□ -2.29
VPS13CQ709C8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 ATG12P2-201ENST00000456830 416 ntBASIC0.77□□□□□ -2.29
VPS13CQ709C8 AC012181.1-201ENST00000479895 423 ntBASIC0.77□□□□□ -2.29
VPS13CQ709C8 SEM1P1-201ENST00000506694 209 ntBASIC0.77□□□□□ -2.29
VPS13CQ709C8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 CYCSP23-201ENST00000519781 313 ntBASIC0.77□□□□□ -2.29
VPS13CQ709C8 MIR6835-201ENST00000621552 64 ntBASIC0.77□□□□□ -2.29
VPS13CQ709C8 Y_RNA.280-201ENST00000364765 112 ntBASIC0.77□□□□□ -2.29
VPS13CQ709C8 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 GDI2P2-201ENST00000445131 608 ntBASIC0.77□□□□□ -2.29
VPS13CQ709C8 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.77□□□□□ -2.29
VPS13CQ709C8 AL133393.1-201ENST00000603277 287 ntBASIC0.77□□□□□ -2.29
VPS13CQ709C8 CR382285.2-201ENST00000624662 1495 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13CQ709C8 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.76□□□□□ -2.29
VPS13CQ709C8 RPL21P90-201ENST00000415692 466 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 AC099336.2-201ENST00000422457 254 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 COX6CP18-201ENST00000448769 222 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 AC022493.1-201ENST00000492984 337 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.76□□□□□ -2.29
VPS13CQ709C8 RPL37P25-201ENST00000507308 276 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.76□□□□□ -2.29
VPS13CQ709C8 AC024619.4-201ENST00000580924 316 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13CQ709C8 EFTUD1P2-201ENST00000514817 1603 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 SSXP10-201ENST00000402595 565 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 SNORA79B-201ENST00000410557 148 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 RNA5SP498-201ENST00000411342 120 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 AC233728.2-201ENST00000425348 757 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 RPS27AP18-201ENST00000515536 459 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 APOOP3-201ENST00000536787 586 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.76□□□□□ -2.29
VPS13CQ709C8 AC108706.1-201ENST00000611053 297 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 AC016590.3-201ENST00000611171 753 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.76□□□□□ -2.29
VPS13CQ709C8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13CQ709C8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
VPS13CQ709C8 NUP35P2-201ENST00000416748 943 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC0.76□□□□□ -2.29
VPS13CQ709C8 AC016691.1-201ENST00000441321 413 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 AL500527.1-201ENST00000448532 255 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC0.76□□□□□ -2.29
VPS13CQ709C8 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.76□□□□□ -2.29
VPS13CQ709C8 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 AC010200.2-201ENST00000605098 235 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 AC211469.2-201ENST00000605461 205 ntBASIC0.76□□□□□ -2.29
VPS13CQ709C8 AC112503.2-201ENST00000609005 552 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms