Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 OSBPL9P3-201ENST00000534523 595 ntBASIC1.45□□□□□ -2.18
UBR3Q6ZT12 GLYCAM1-201ENST00000546596 285 ntBASIC1.45□□□□□ -2.18
UBR3Q6ZT12 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.45□□□□□ -2.18
UBR3Q6ZT12 MIR3122-201ENST00000577243 73 ntBASIC1.45□□□□□ -2.18
UBR3Q6ZT12 VN1R107P-201ENST00000601784 209 ntBASIC1.45□□□□□ -2.18
UBR3Q6ZT12 AC123912.5-201ENST00000605470 343 ntBASIC1.45□□□□□ -2.18
UBR3Q6ZT12 AC008962.1-201ENST00000605729 304 ntBASIC1.45□□□□□ -2.18
UBR3Q6ZT12 AL355816.1-201ENST00000607951 118 ntBASIC1.45□□□□□ -2.18
UBR3Q6ZT12 AC130650.2-201ENST00000618736 2403 ntBASIC1.44□□□□□ -2.18
UBR3Q6ZT12 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
UBR3Q6ZT12 DNAJC19P6-201ENST00000401853 280 ntBASIC1.44□□□□□ -2.18
UBR3Q6ZT12 SNORD23.1-201ENST00000408212 104 ntBASIC1.44□□□□□ -2.18
UBR3Q6ZT12 POLR2J4-204ENST00000418424 324 ntBASIC1.44□□□□□ -2.18
UBR3Q6ZT12 VN1R108P-201ENST00000431580 830 ntBASIC1.44□□□□□ -2.18
UBR3Q6ZT12 AC234775.1-201ENST00000454247 670 ntBASIC1.44□□□□□ -2.18
UBR3Q6ZT12 AC108059.3-201ENST00000456388 214 ntBASIC1.44□□□□□ -2.18
UBR3Q6ZT12 AC104685.1-201ENST00000502445 371 ntBASIC1.44□□□□□ -2.18
UBR3Q6ZT12 AC022690.1-201ENST00000526681 550 ntBASIC1.44□□□□□ -2.18
UBR3Q6ZT12 AC109635.4-202ENST00000531666 412 ntBASIC1.44□□□□□ -2.18
UBR3Q6ZT12 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.44□□□□□ -2.18
UBR3Q6ZT12 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.44□□□□□ -2.18
UBR3Q6ZT12 AC011712.1-201ENST00000588959 234 ntBASIC1.44□□□□□ -2.18
UBR3Q6ZT12 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.44□□□□□ -2.18
UBR3Q6ZT12 AC106028.5-201ENST00000610332 395 ntBASIC1.44□□□□□ -2.18
UBR3Q6ZT12 RNF6P1-201ENST00000444889 1784 ntBASIC1.44□□□□□ -2.18
UBR3Q6ZT12 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
UBR3Q6ZT12 Y_RNA.205-201ENST00000364128 113 ntBASIC1.43□□□□□ -2.18
UBR3Q6ZT12 RNU1-139P-201ENST00000391307 165 ntBASIC1.43□□□□□ -2.18
UBR3Q6ZT12 AC233728.2-201ENST00000425348 757 ntBASIC1.43□□□□□ -2.18
UBR3Q6ZT12 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.43□□□□□ -2.18
UBR3Q6ZT12 AL035407.2-201ENST00000454090 378 ntBASIC1.43□□□□□ -2.18
UBR3Q6ZT12 AC145207.9-201ENST00000623802 325 ntBASIC1.43□□□□□ -2.18
UBR3Q6ZT12 MFSD8-213ENST00000641134 1327 ntBASIC1.43□□□□□ -2.18
UBR3Q6ZT12 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
UBR3Q6ZT12 RN7SKP51-201ENST00000410781 304 ntBASIC1.43□□□□□ -2.18
UBR3Q6ZT12 RPL21P66-201ENST00000426566 466 ntBASIC1.43□□□□□ -2.18
UBR3Q6ZT12 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.43□□□□□ -2.18
UBR3Q6ZT12 MTND3P24-201ENST00000506306 329 ntBASIC1.43□□□□□ -2.18
UBR3Q6ZT12 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.43□□□□□ -2.18
UBR3Q6ZT12 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.43□□□□□ -2.18
UBR3Q6ZT12 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.43□□□□□ -2.18
UBR3Q6ZT12 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
UBR3Q6ZT12 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.42□□□□□ -2.18
UBR3Q6ZT12 AC234781.2-201ENST00000426370 994 ntBASIC1.42□□□□□ -2.18
UBR3Q6ZT12 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.42□□□□□ -2.18
UBR3Q6ZT12 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.42□□□□□ -2.18
UBR3Q6ZT12 TPRKBP1-201ENST00000456243 481 ntBASIC1.42□□□□□ -2.18
UBR3Q6ZT12 RNA5SP233-201ENST00000459153 113 ntBASIC1.42□□□□□ -2.18
UBR3Q6ZT12 AC114322.1-201ENST00000506771 926 ntBASIC1.42□□□□□ -2.18
UBR3Q6ZT12 RNA5SP436-201ENST00000516020 115 ntBASIC1.42□□□□□ -2.18
UBR3Q6ZT12 AC118942.1-201ENST00000529674 1035 ntBASIC1.42□□□□□ -2.18
UBR3Q6ZT12 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.42□□□□□ -2.18
UBR3Q6ZT12 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
UBR3Q6ZT12 RNU6-1072P-201ENST00000384703 107 ntBASIC1.41□□□□□ -2.18
UBR3Q6ZT12 RNU6-443P-201ENST00000384780 107 ntBASIC1.41□□□□□ -2.18
UBR3Q6ZT12 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.41□□□□□ -2.18
UBR3Q6ZT12 ARL5AP2-201ENST00000444698 533 ntBASIC1.41□□□□□ -2.18
UBR3Q6ZT12 RFC5P1-201ENST00000454419 874 ntBASIC1.41□□□□□ -2.18
UBR3Q6ZT12 FO393415.2-201ENST00000480085 343 ntBASIC1.41□□□□□ -2.18
UBR3Q6ZT12 AC105914.1-201ENST00000511798 226 ntBASIC1.41□□□□□ -2.18
UBR3Q6ZT12 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.41□□□□□ -2.18
UBR3Q6ZT12 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.41□□□□□ -2.18
UBR3Q6ZT12 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.41□□□□□ -2.18
UBR3Q6ZT12 AL138880.1-201ENST00000405824 642 ntBASIC1.41□□□□□ -2.18
UBR3Q6ZT12 SNRPEP10-201ENST00000420249 274 ntBASIC1.41□□□□□ -2.18
UBR3Q6ZT12 RPL31P63-201ENST00000422565 375 ntBASIC1.41□□□□□ -2.18
UBR3Q6ZT12 AC244033.1-201ENST00000426826 870 ntBASIC1.41□□□□□ -2.18
UBR3Q6ZT12 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.41□□□□□ -2.18
UBR3Q6ZT12 AC126118.1-201ENST00000607744 628 ntBASIC1.41□□□□□ -2.18
UBR3Q6ZT12 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
UBR3Q6ZT12 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.4□□□□□ -2.18
UBR3Q6ZT12 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
UBR3Q6ZT12 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
UBR3Q6ZT12 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
UBR3Q6ZT12 PGBD4P6-201ENST00000421501 610 ntBASIC1.4□□□□□ -2.19
UBR3Q6ZT12 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.4□□□□□ -2.19
UBR3Q6ZT12 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.4□□□□□ -2.19
UBR3Q6ZT12 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.4□□□□□ -2.19
UBR3Q6ZT12 RNA5SP384-201ENST00000516615 116 ntBASIC1.4□□□□□ -2.19
UBR3Q6ZT12 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.4□□□□□ -2.19
UBR3Q6ZT12 AL445493.3-201ENST00000619568 477 ntBASIC1.4□□□□□ -2.19
UBR3Q6ZT12 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
UBR3Q6ZT12 RNU6-629P-201ENST00000384061 103 ntBASIC1.39□□□□□ -2.19
UBR3Q6ZT12 RNU6-997P-201ENST00000384725 107 ntBASIC1.39□□□□□ -2.19
UBR3Q6ZT12 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.39□□□□□ -2.19
UBR3Q6ZT12 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.39□□□□□ -2.19
UBR3Q6ZT12 AC078857.1-201ENST00000469870 667 ntBASIC1.39□□□□□ -2.19
UBR3Q6ZT12 OR5BM1P-201ENST00000512021 366 ntBASIC1.39□□□□□ -2.19
UBR3Q6ZT12 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.39□□□□□ -2.19
UBR3Q6ZT12 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.39□□□□□ -2.19
UBR3Q6ZT12 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UBR3Q6ZT12 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.39□□□□□ -2.19
UBR3Q6ZT12 MIR4714-201ENST00000580728 77 ntBASIC1.39□□□□□ -2.19
UBR3Q6ZT12 AC009090.3-201ENST00000616553 565 ntBASIC1.39□□□□□ -2.19
UBR3Q6ZT12 RNU4-38P-201ENST00000364472 129 ntBASIC1.39□□□□□ -2.19
UBR3Q6ZT12 AL034374.1-201ENST00000406329 351 ntBASIC1.39□□□□□ -2.19
UBR3Q6ZT12 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.39□□□□□ -2.19
UBR3Q6ZT12 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.39□□□□□ -2.19
UBR3Q6ZT12 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.39□□□□□ -2.19
UBR3Q6ZT12 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms