Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL133270.1-201ENST00000402635 279 ntBASIC6.12□□□□□ -1.43
VARS2Q5ST30 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VARS2Q5ST30 AC113412.1-201ENST00000425840 504 ntBASIC6.12□□□□□ -1.43
VARS2Q5ST30 RN7SL329P-201ENST00000467740 299 ntBASIC6.12□□□□□ -1.43
VARS2Q5ST30 RPS4XP13-201ENST00000483219 789 ntBASIC6.12□□□□□ -1.43
VARS2Q5ST30 AL136360.1-201ENST00000503377 1900 ntBASIC6.12□□□□□ -1.43
VARS2Q5ST30 RNU6-453P-201ENST00000516819 85 ntBASIC6.12□□□□□ -1.43
VARS2Q5ST30 RNU6-1315P-201ENST00000517187 99 ntBASIC6.12□□□□□ -1.43
VARS2Q5ST30 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.12□□□□□ -1.43
VARS2Q5ST30 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VARS2Q5ST30 AC097461.1-201ENST00000568928 2821 ntBASIC6.12□□□□□ -1.43
VARS2Q5ST30 MIR1273C-201ENST00000578669 77 ntBASIC6.12□□□□□ -1.43
VARS2Q5ST30 MIR5695-201ENST00000579717 85 ntBASIC6.12□□□□□ -1.43
VARS2Q5ST30 AL391813.1-201ENST00000603098 260 ntBASIC6.12□□□□□ -1.43
VARS2Q5ST30 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VARS2Q5ST30 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
VARS2Q5ST30 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
VARS2Q5ST30 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VARS2Q5ST30 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.12□□□□□ -1.43
VARS2Q5ST30 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VARS2Q5ST30 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VARS2Q5ST30 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC6.11□□□□□ -1.43
VARS2Q5ST30 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.11□□□□□ -1.43
VARS2Q5ST30 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.11□□□□□ -1.43
VARS2Q5ST30 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
VARS2Q5ST30 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 SNORD58C-201ENST00000365223 64 ntBASIC6.11□□□□□ -1.43
VARS2Q5ST30 RNA5SP131-201ENST00000365452 119 ntBASIC6.11□□□□□ -1.43
VARS2Q5ST30 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.11□□□□□ -1.43
VARS2Q5ST30 AL049745.1-201ENST00000433953 286 ntBASIC6.11□□□□□ -1.43
VARS2Q5ST30 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC6.11□□□□□ -1.43
VARS2Q5ST30 HMGN2P32-201ENST00000444648 269 ntBASIC6.11□□□□□ -1.43
VARS2Q5ST30 RPS27P1-201ENST00000450552 247 ntBASIC6.11□□□□□ -1.43
VARS2Q5ST30 snoU13.7-201ENST00000459220 104 ntBASIC6.11□□□□□ -1.43
VARS2Q5ST30 RNU6-1007P-201ENST00000516586 107 ntBASIC6.11□□□□□ -1.43
VARS2Q5ST30 AC008121.1-201ENST00000603244 268 ntBASIC6.11□□□□□ -1.43
VARS2Q5ST30 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC6.11□□□□□ -1.43
VARS2Q5ST30 AC134878.1-201ENST00000619901 243 ntBASIC6.11□□□□□ -1.43
VARS2Q5ST30 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC6.11□□□□□ -1.43
VARS2Q5ST30 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.11□□□□□ -1.43
VARS2Q5ST30 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC6.11□□□□□ -1.43
VARS2Q5ST30 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VARS2Q5ST30 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.11□□□□□ -1.43
VARS2Q5ST30 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VARS2Q5ST30 AC016745.2-201ENST00000608834 3443 ntBASIC6.11□□□□□ -1.43
VARS2Q5ST30 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.1□□□□□ -1.43
VARS2Q5ST30 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VARS2Q5ST30 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VARS2Q5ST30 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.1□□□□□ -1.43
VARS2Q5ST30 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.1□□□□□ -1.43
VARS2Q5ST30 Y_RNA.221-201ENST00000364248 96 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 MIR548A1-201ENST00000385041 97 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 MIR15B-201ENST00000385045 98 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 MIR616-201ENST00000385293 97 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 BTF3L4P2-201ENST00000392798 346 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 MIR1286-201ENST00000408112 78 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 AC017078.1-201ENST00000416146 368 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 PPP1R11P2-201ENST00000423543 382 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.1□□□□□ -1.43
VARS2Q5ST30 HSPE1P21-201ENST00000438283 308 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 CYCSP51-201ENST00000443545 318 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 AC073850.1-201ENST00000449243 255 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 AL353705.4-201ENST00000449661 238 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 OR2AO1P-201ENST00000476497 403 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 RN7SL30P-201ENST00000488416 306 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 RNU6-1146P-201ENST00000516282 102 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.1□□□□□ -1.43
VARS2Q5ST30 OR4H12P-201ENST00000556269 907 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 AL157871.3-201ENST00000557231 293 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 HMGB1P14-201ENST00000557424 591 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 AL442128.1-201ENST00000615151 90 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 AL078604.3-201ENST00000615580 211 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VARS2Q5ST30 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.1□□□□□ -1.43
VARS2Q5ST30 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VARS2Q5ST30 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VARS2Q5ST30 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
VARS2Q5ST30 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
VARS2Q5ST30 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VARS2Q5ST30 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
VARS2Q5ST30 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VARS2Q5ST30 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC6.09□□□□□ -1.43
VARS2Q5ST30 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VARS2Q5ST30 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
VARS2Q5ST30 AC005725.1-201ENST00000577346 2607 ntBASIC6.09□□□□□ -1.43
VARS2Q5ST30 RNVU1-3-201ENST00000364313 161 ntBASIC6.09□□□□□ -1.43
VARS2Q5ST30 RNU4-10P-201ENST00000364383 140 ntBASIC6.09□□□□□ -1.43
VARS2Q5ST30 SNORA72.2-201ENST00000365028 127 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms