Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.39□□□□□ -2.19
UBA52P62987 AL645568.3-201ENST00000433683 316 ntBASIC1.39□□□□□ -2.19
UBA52P62987 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.39□□□□□ -2.19
UBA52P62987 AL512661.1-201ENST00000434586 1253 ntBASIC1.39□□□□□ -2.19
UBA52P62987 AC004383.1-201ENST00000438135 289 ntBASIC1.39□□□□□ -2.19
UBA52P62987 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.39□□□□□ -2.19
UBA52P62987 USP9YP15-201ENST00000442391 422 ntBASIC1.39□□□□□ -2.19
UBA52P62987 HMGB1P26-201ENST00000452520 628 ntBASIC1.39□□□□□ -2.19
UBA52P62987 HMGN1P8-201ENST00000463578 288 ntBASIC1.39□□□□□ -2.19
UBA52P62987 AL121769.1-201ENST00000469473 401 ntBASIC1.39□□□□□ -2.19
UBA52P62987 AC107626.1-201ENST00000471084 183 ntBASIC1.39□□□□□ -2.19
UBA52P62987 AC055855.1-201ENST00000489563 579 ntBASIC1.39□□□□□ -2.19
UBA52P62987 AC091965.2-201ENST00000512324 613 ntBASIC1.39□□□□□ -2.19
UBA52P62987 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.39□□□□□ -2.19
UBA52P62987 DNAJC19P9-201ENST00000555084 351 ntBASIC1.39□□□□□ -2.19
UBA52P62987 HSBP1P1-201ENST00000555205 166 ntBASIC1.39□□□□□ -2.19
UBA52P62987 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.39□□□□□ -2.19
UBA52P62987 AC005034.5-201ENST00000604219 466 ntBASIC1.39□□□□□ -2.19
UBA52P62987 AC068944.2-201ENST00000610373 403 ntBASIC1.39□□□□□ -2.19
UBA52P62987 AC004852.3-201ENST00000614131 326 ntBASIC1.39□□□□□ -2.19
UBA52P62987 MIR7111-201ENST00000619751 72 ntBASIC1.39□□□□□ -2.19
UBA52P62987 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.39□□□□□ -2.19
UBA52P62987 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.39□□□□□ -2.19
UBA52P62987 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.39□□□□□ -2.19
UBA52P62987 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
UBA52P62987 AC131280.1-202ENST00000624067 4211 ntBASIC1.39□□□□□ -2.19
UBA52P62987 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
UBA52P62987 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
UBA52P62987 RNU6-185P-201ENST00000384421 107 ntBASIC1.38□□□□□ -2.19
UBA52P62987 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.38□□□□□ -2.19
UBA52P62987 RPS7P9-201ENST00000414704 586 ntBASIC1.38□□□□□ -2.19
UBA52P62987 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.38□□□□□ -2.19
UBA52P62987 OR10R1P-201ENST00000441524 1141 ntBASIC1.38□□□□□ -2.19
UBA52P62987 PNPLA4P1-201ENST00000458328 305 ntBASIC1.38□□□□□ -2.19
UBA52P62987 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.38□□□□□ -2.19
UBA52P62987 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.38□□□□□ -2.19
UBA52P62987 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.38□□□□□ -2.19
UBA52P62987 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.38□□□□□ -2.19
UBA52P62987 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.38□□□□□ -2.19
UBA52P62987 RPS3AP4-201ENST00000555161 764 ntBASIC1.38□□□□□ -2.19
UBA52P62987 AL354943.1-201ENST00000572103 781 ntBASIC1.38□□□□□ -2.19
UBA52P62987 AC013444.2-201ENST00000603317 787 ntBASIC1.38□□□□□ -2.19
UBA52P62987 AC002487.1-201ENST00000604565 994 ntBASIC1.38□□□□□ -2.19
UBA52P62987 AC106052.1-201ENST00000608029 497 ntBASIC1.38□□□□□ -2.19
UBA52P62987 AL512598.1-201ENST00000610158 273 ntBASIC1.38□□□□□ -2.19
UBA52P62987 MIR8070-201ENST00000616510 88 ntBASIC1.38□□□□□ -2.19
UBA52P62987 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.38□□□□□ -2.19
UBA52P62987 MIR7515-201ENST00000637837 67 ntBASIC1.38□□□□□ -2.19
UBA52P62987 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
UBA52P62987 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.38□□□□□ -2.19
UBA52P62987 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
UBA52P62987 AC130650.2-201ENST00000618736 2403 ntBASIC1.37□□□□□ -2.19
UBA52P62987 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.37□□□□□ -2.19
UBA52P62987 RNU6-1243P-201ENST00000364028 107 ntBASIC1.37□□□□□ -2.19
UBA52P62987 RNU6-374P-201ENST00000364146 108 ntBASIC1.37□□□□□ -2.19
UBA52P62987 Y_RNA.269-201ENST00000364685 89 ntBASIC1.37□□□□□ -2.19
UBA52P62987 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.37□□□□□ -2.19
UBA52P62987 MIR499A-201ENST00000384903 122 ntBASIC1.37□□□□□ -2.19
UBA52P62987 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.37□□□□□ -2.19
UBA52P62987 EIF4EP4-201ENST00000424916 578 ntBASIC1.37□□□□□ -2.19
UBA52P62987 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.37□□□□□ -2.19
UBA52P62987 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.37□□□□□ -2.19
UBA52P62987 TAF9P1-201ENST00000445421 515 ntBASIC1.37□□□□□ -2.19
UBA52P62987 TAF9P2-201ENST00000454958 515 ntBASIC1.37□□□□□ -2.19
UBA52P62987 FO393415.2-201ENST00000480085 343 ntBASIC1.37□□□□□ -2.19
UBA52P62987 AC026801.1-201ENST00000497178 464 ntBASIC1.37□□□□□ -2.19
UBA52P62987 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.37□□□□□ -2.19
UBA52P62987 RNU6-1308P-201ENST00000516817 103 ntBASIC1.37□□□□□ -2.19
UBA52P62987 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.37□□□□□ -2.19
UBA52P62987 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.37□□□□□ -2.19
UBA52P62987 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.37□□□□□ -2.19
UBA52P62987 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.37□□□□□ -2.19
UBA52P62987 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.37□□□□□ -2.19
UBA52P62987 MIR4299-201ENST00000577899 72 ntBASIC1.37□□□□□ -2.19
UBA52P62987 AC124283.4-201ENST00000581815 456 ntBASIC1.37□□□□□ -2.19
UBA52P62987 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.37□□□□□ -2.19
UBA52P62987 AP001542.2-201ENST00000593141 364 ntBASIC1.37□□□□□ -2.19
UBA52P62987 AC126118.1-201ENST00000607744 628 ntBASIC1.37□□□□□ -2.19
UBA52P62987 uc_338.5-201ENST00000611839 155 ntBASIC1.37□□□□□ -2.19
UBA52P62987 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
UBA52P62987 HPVC1-201ENST00000629899 1198 ntBASIC1.37□□□□□ -2.19
UBA52P62987 AL356118.1-201ENST00000635272 1078 ntBASIC1.37□□□□□ -2.19
UBA52P62987 AC008555.8-201ENST00000623602 2168 ntBASIC1.37□□□□□ -2.19
UBA52P62987 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.37□□□□□ -2.19
UBA52P62987 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.36□□□□□ -2.19
UBA52P62987 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.36□□□□□ -2.19
UBA52P62987 SNORA25.9-201ENST00000365087 128 ntBASIC1.36□□□□□ -2.19
UBA52P62987 Y_RNA.493-201ENST00000384422 102 ntBASIC1.36□□□□□ -2.19
UBA52P62987 MT-TC-201ENST00000387405 66 ntBASIC1.36□□□□□ -2.19
UBA52P62987 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
UBA52P62987 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.36□□□□□ -2.19
UBA52P62987 AL161449.1-201ENST00000414531 1199 ntBASIC1.36□□□□□ -2.19
UBA52P62987 RPS15AP12-201ENST00000419498 388 ntBASIC1.36□□□□□ -2.19
UBA52P62987 OFD1P18Y-201ENST00000420889 959 ntBASIC1.36□□□□□ -2.19
UBA52P62987 AL353689.1-201ENST00000438895 199 ntBASIC1.36□□□□□ -2.19
UBA52P62987 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.36□□□□□ -2.19
UBA52P62987 SSXP1-201ENST00000453640 473 ntBASIC1.36□□□□□ -2.19
UBA52P62987 RNU7-95P-201ENST00000459222 64 ntBASIC1.36□□□□□ -2.19
UBA52P62987 AC087884.1-201ENST00000469738 328 ntBASIC1.36□□□□□ -2.19
UBA52P62987 AC140059.1-201ENST00000489238 361 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms