Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
RPL39P62891 RNU6-53P-201ENST00000365367 106 ntBASIC0.52□□□□□ -2.33
RPL39P62891 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.52□□□□□ -2.33
RPL39P62891 MTND5P15-201ENST00000434246 349 ntBASIC0.52□□□□□ -2.33
RPL39P62891 SNRPFP4-201ENST00000456366 242 ntBASIC0.52□□□□□ -2.33
RPL39P62891 SETP11-201ENST00000473027 690 ntBASIC0.52□□□□□ -2.33
RPL39P62891 RPL30P14-201ENST00000482744 348 ntBASIC0.52□□□□□ -2.33
RPL39P62891 RPS23P4-201ENST00000487908 423 ntBASIC0.52□□□□□ -2.33
RPL39P62891 RPL30P5-201ENST00000494923 336 ntBASIC0.52□□□□□ -2.33
RPL39P62891 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.52□□□□□ -2.33
RPL39P62891 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.52□□□□□ -2.33
RPL39P62891 RNU6-964P-201ENST00000516524 69 ntBASIC0.52□□□□□ -2.33
RPL39P62891 COX6B1P6-201ENST00000522347 255 ntBASIC0.52□□□□□ -2.33
RPL39P62891 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.52□□□□□ -2.33
RPL39P62891 AC008945.2-201ENST00000606056 604 ntBASIC0.52□□□□□ -2.33
RPL39P62891 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.52□□□□□ -2.33
RPL39P62891 AC091895.1-201ENST00000624494 256 ntBASIC0.52□□□□□ -2.33
RPL39P62891 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.52□□□□□ -2.33
RPL39P62891 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
RPL39P62891 SGO1P2-201ENST00000429458 1589 ntBASIC0.52□□□□□ -2.33
RPL39P62891 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.52□□□□□ -2.33
RPL39P62891 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.51□□□□□ -2.33
RPL39P62891 AK9-203ENST00000368948 2478 ntTSL 5 BASIC0.51□□□□□ -2.33
RPL39P62891 MIR618-201ENST00000385287 98 ntBASIC0.51□□□□□ -2.33
RPL39P62891 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC0.51□□□□□ -2.33
RPL39P62891 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.51□□□□□ -2.33
RPL39P62891 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC0.51□□□□□ -2.33
RPL39P62891 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.51□□□□□ -2.33
RPL39P62891 RPL23AP6-201ENST00000446637 472 ntBASIC0.51□□□□□ -2.33
RPL39P62891 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.51□□□□□ -2.33
RPL39P62891 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.51□□□□□ -2.33
RPL39P62891 TRGVB-201ENST00000453257 471 ntBASIC0.51□□□□□ -2.33
RPL39P62891 MTATP6P7-201ENST00000453315 681 ntBASIC0.51□□□□□ -2.33
RPL39P62891 KATNBL1P4-201ENST00000503545 918 ntBASIC0.51□□□□□ -2.33
RPL39P62891 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.51□□□□□ -2.33
RPL39P62891 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.51□□□□□ -2.33
RPL39P62891 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.51□□□□□ -2.33
RPL39P62891 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC0.51□□□□□ -2.33
RPL39P62891 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.51□□□□□ -2.33
RPL39P62891 AP003497.1-201ENST00000528472 562 ntBASIC0.51□□□□□ -2.33
RPL39P62891 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.51□□□□□ -2.33
RPL39P62891 AL121839.1-201ENST00000556233 1185 ntBASIC0.51□□□□□ -2.33
RPL39P62891 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.51□□□□□ -2.33
RPL39P62891 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.51□□□□□ -2.33
RPL39P62891 AC040174.2-201ENST00000602701 465 ntBASIC0.51□□□□□ -2.33
RPL39P62891 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.51□□□□□ -2.33
RPL39P62891 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.51□□□□□ -2.33
RPL39P62891 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.51□□□□□ -2.33
RPL39P62891 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.5□□□□□ -2.33
RPL39P62891 MTND5P9-201ENST00000503854 1755 ntBASIC0.5□□□□□ -2.33
RPL39P62891 MIR378A-201ENST00000362177 66 ntBASIC0.5□□□□□ -2.33
RPL39P62891 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.5□□□□□ -2.33
RPL39P62891 AL121890.1-201ENST00000435457 205 ntBASIC0.5□□□□□ -2.33
RPL39P62891 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.5□□□□□ -2.33
RPL39P62891 TPTE2P6-202ENST00000445572 1007 ntBASIC0.5□□□□□ -2.33
RPL39P62891 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.5□□□□□ -2.33
RPL39P62891 AC010301.1-201ENST00000473936 355 ntBASIC0.5□□□□□ -2.33
RPL39P62891 AC023141.11-201ENST00000508864 202 ntBASIC0.5□□□□□ -2.33
RPL39P62891 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.5□□□□□ -2.33
RPL39P62891 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC0.5□□□□□ -2.33
RPL39P62891 AP005902.1-201ENST00000521358 186 ntBASIC0.5□□□□□ -2.33
RPL39P62891 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.5□□□□□ -2.33
RPL39P62891 AC010546.1-201ENST00000569391 485 ntBASIC0.5□□□□□ -2.33
RPL39P62891 MIR3973-201ENST00000579824 107 ntBASIC0.5□□□□□ -2.33
RPL39P62891 MIR3616-201ENST00000584070 92 ntBASIC0.5□□□□□ -2.33
RPL39P62891 VN1R107P-201ENST00000601784 209 ntBASIC0.5□□□□□ -2.33
RPL39P62891 AL161912.3-201ENST00000605404 628 ntBASIC0.5□□□□□ -2.33
RPL39P62891 MIR6857-201ENST00000613267 93 ntBASIC0.5□□□□□ -2.33
RPL39P62891 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
RPL39P62891 AL138880.2-201ENST00000616214 239 ntBASIC0.5□□□□□ -2.33
RPL39P62891 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
RPL39P62891 ZNF702P-202ENST00000434269 1966 ntBASIC0.5□□□□□ -2.33
RPL39P62891 AC087359.1-201ENST00000508335 1740 ntBASIC0.5□□□□□ -2.33
RPL39P62891 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.49□□□□□ -2.33
RPL39P62891 RNU6-335P-201ENST00000364563 113 ntBASIC0.49□□□□□ -2.33
RPL39P62891 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.49□□□□□ -2.33
RPL39P62891 RNU11-5P-201ENST00000391216 129 ntBASIC0.49□□□□□ -2.33
RPL39P62891 FCF1P2-201ENST00000415284 583 ntBASIC0.49□□□□□ -2.33
RPL39P62891 AC092634.2-201ENST00000428146 1010 ntBASIC0.49□□□□□ -2.33
RPL39P62891 AC245047.4-201ENST00000433189 144 ntBASIC0.49□□□□□ -2.33
RPL39P62891 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC0.49□□□□□ -2.33
RPL39P62891 BMI1P1-201ENST00000445879 941 ntBASIC0.49□□□□□ -2.33
RPL39P62891 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.49□□□□□ -2.33
RPL39P62891 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.49□□□□□ -2.33
RPL39P62891 RPS3AP22-201ENST00000488297 769 ntBASIC0.49□□□□□ -2.33
RPL39P62891 AC117454.1-201ENST00000491120 168 ntBASIC0.49□□□□□ -2.33
RPL39P62891 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC0.49□□□□□ -2.33
RPL39P62891 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.49□□□□□ -2.33
RPL39P62891 SNORA31.18-201ENST00000517043 134 ntBASIC0.49□□□□□ -2.33
RPL39P62891 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.49□□□□□ -2.33
RPL39P62891 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.49□□□□□ -2.33
RPL39P62891 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.49□□□□□ -2.33
RPL39P62891 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.49□□□□□ -2.33
RPL39P62891 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC0.49□□□□□ -2.33
RPL39P62891 AC097504.2-201ENST00000608088 454 ntBASIC0.49□□□□□ -2.33
RPL39P62891 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.49□□□□□ -2.33
RPL39P62891 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
RPL39P62891 AC099063.3-201ENST00000642066 185 ntBASIC0.49□□□□□ -2.33
RPL39P62891 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.48□□□□□ -2.33
RPL39P62891 TEX21P-201ENST00000447107 1476 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms