Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.8□□□□□ -1.64
RTP1P59025 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.79□□□□□ -1.64
RTP1P59025 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RTP1P59025 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTP1P59025 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP1P59025 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTP1P59025 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
RTP1P59025 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP1P59025 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP1P59025 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.79□□□□□ -1.64
RTP1P59025 Y_RNA.5-201ENST00000362334 102 ntBASIC4.79□□□□□ -1.64
RTP1P59025 RNU6-82P-201ENST00000363970 107 ntBASIC4.79□□□□□ -1.64
RTP1P59025 Y_RNA.212-201ENST00000364177 102 ntBASIC4.79□□□□□ -1.64
RTP1P59025 RNU6-188P-201ENST00000364207 107 ntBASIC4.79□□□□□ -1.64
RTP1P59025 RNA5SP175-201ENST00000364275 119 ntBASIC4.79□□□□□ -1.64
RTP1P59025 RNU6-1318P-201ENST00000365389 103 ntBASIC4.79□□□□□ -1.64
RTP1P59025 RNU6-61P-201ENST00000365528 109 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AC117470.1-201ENST00000381974 330 ntBASIC4.79□□□□□ -1.64
RTP1P59025 Y_RNA.482-201ENST00000384377 111 ntBASIC4.79□□□□□ -1.64
RTP1P59025 SNORA24.1-201ENST00000384401 135 ntBASIC4.79□□□□□ -1.64
RTP1P59025 RNU6-505P-201ENST00000384427 107 ntBASIC4.79□□□□□ -1.64
RTP1P59025 Y_RNA.576-201ENST00000384781 102 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AC097374.1-203ENST00000400783 485 ntBASIC4.79□□□□□ -1.64
RTP1P59025 RNU6-985P-201ENST00000410182 104 ntBASIC4.79□□□□□ -1.64
RTP1P59025 RNU6-954P-201ENST00000411355 107 ntBASIC4.79□□□□□ -1.64
RTP1P59025 POLHP1-201ENST00000411806 470 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP1P59025 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP1P59025 AL139396.1-201ENST00000421137 167 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AL157831.1-201ENST00000426134 473 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP1P59025 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.79□□□□□ -1.64
RTP1P59025 AF228730.2-201ENST00000438784 848 ntBASIC4.79□□□□□ -1.64
RTP1P59025 TXNP1-201ENST00000441872 371 ntBASIC4.79□□□□□ -1.64
RTP1P59025 MTND1P17-201ENST00000448961 204 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP1P59025 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP1P59025 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP1P59025 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.79□□□□□ -1.64
RTP1P59025 AC016065.2-201ENST00000514530 444 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP1P59025 MTCO2P24-201ENST00000515611 426 ntBASIC4.79□□□□□ -1.64
RTP1P59025 RNU6-64P-201ENST00000517119 105 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.79□□□□□ -1.64
RTP1P59025 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.79□□□□□ -1.64
RTP1P59025 OR11H5P-201ENST00000554039 926 ntBASIC4.79□□□□□ -1.64
RTP1P59025 MIR5685-201ENST00000579080 79 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.79□□□□□ -1.64
RTP1P59025 AL606490.9-201ENST00000603331 271 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AC123786.2-201ENST00000603459 275 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AC092747.3-201ENST00000603769 301 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AC010680.4-201ENST00000605334 543 ntBASIC4.79□□□□□ -1.64
RTP1P59025 FAM27D1-201ENST00000612308 341 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AC116447.1-201ENST00000613153 453 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AL357559.1-201ENST00000622228 274 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AC008013.2-202ENST00000637965 364 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AC119674.1-207ENST00000641355 633 ntBASIC4.79□□□□□ -1.64
RTP1P59025 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTP1P59025 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RTP1P59025 AC139713.2-215ENST00000641428 5037 ntBASIC4.79□□□□□ -1.64
RTP1P59025 SCN1A-220ENST00000641603 12506 ntBASIC4.79□□□□□ -1.64
RTP1P59025 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RTP1P59025 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RTP1P59025 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.78□□□□□ -1.64
RTP1P59025 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
RTP1P59025 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTP1P59025 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RTP1P59025 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTP1P59025 MT-TR-201ENST00000387439 65 ntBASIC4.78□□□□□ -1.64
RTP1P59025 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.78□□□□□ -1.64
RTP1P59025 NUP35P1-201ENST00000422734 947 ntBASIC4.78□□□□□ -1.64
RTP1P59025 AL160004.2-201ENST00000432935 350 ntBASIC4.78□□□□□ -1.64
RTP1P59025 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.78□□□□□ -1.64
RTP1P59025 AC105402.2-201ENST00000438503 358 ntBASIC4.78□□□□□ -1.64
RTP1P59025 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.78□□□□□ -1.64
RTP1P59025 AL035666.1-201ENST00000446195 348 ntBASIC4.78□□□□□ -1.64
RTP1P59025 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.78□□□□□ -1.64
RTP1P59025 snoU13.24-201ENST00000458998 104 ntBASIC4.78□□□□□ -1.64
RTP1P59025 MIR2053-201ENST00000459295 91 ntBASIC4.78□□□□□ -1.64
RTP1P59025 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.78□□□□□ -1.64
RTP1P59025 RPL35AP15-201ENST00000468042 339 ntBASIC4.78□□□□□ -1.64
RTP1P59025 RPL21P93-201ENST00000480465 489 ntBASIC4.78□□□□□ -1.64
RTP1P59025 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.78□□□□□ -1.64
RTP1P59025 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.78□□□□□ -1.64
RTP1P59025 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.78□□□□□ -1.64
RTP1P59025 RNA5SP73-201ENST00000516744 108 ntBASIC4.78□□□□□ -1.64
RTP1P59025 RNU6-794P-201ENST00000517261 64 ntBASIC4.78□□□□□ -1.64
RTP1P59025 RANP9-201ENST00000519957 271 ntBASIC4.78□□□□□ -1.64
RTP1P59025 AC023043.2-201ENST00000589678 1026 ntBASIC4.78□□□□□ -1.64
RTP1P59025 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.78□□□□□ -1.64
RTP1P59025 AC012468.1-201ENST00000604888 430 ntBASIC4.78□□□□□ -1.64
RTP1P59025 DUSP12P1-201ENST00000612874 516 ntBASIC4.78□□□□□ -1.64
RTP1P59025 AC012409.4-201ENST00000612923 249 ntBASIC4.78□□□□□ -1.64
RTP1P59025 AC083806.3-201ENST00000614016 455 ntBASIC4.78□□□□□ -1.64
RTP1P59025 AL157817.1-201ENST00000614264 790 ntBASIC4.78□□□□□ -1.64
RTP1P59025 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RTP1P59025 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.78□□□□□ -1.64
RTP1P59025 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RTP1P59025 AC092435.4-201ENST00000623012 4159 ntBASIC4.78□□□□□ -1.64
RTP1P59025 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms