Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.52□□□□□ -2.01
PKNOX1P55347 AC129850.1-201ENST00000436203 508 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 RPS12P2-201ENST00000439728 269 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.52□□□□□ -2.01
PKNOX1P55347 BNIP3P2-201ENST00000441221 577 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 CBWD4P-201ENST00000445695 655 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 BMI1P1-201ENST00000445879 941 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AC009961.3-201ENST00000449832 765 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 snoU13.28-201ENST00000459235 104 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.52□□□□□ -2.01
PKNOX1P55347 AC022447.3-201ENST00000506865 495 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 RNA5SP282-201ENST00000516355 108 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 RNA5SP367-201ENST00000516557 118 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 RPPH1-2P-201ENST00000516688 293 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 SNORA31.15-201ENST00000516771 132 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 NRON-201ENST00000517270 370 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AC105185.1-201ENST00000518705 535 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AC025881.1-201ENST00000518851 512 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.52□□□□□ -2.01
PKNOX1P55347 CKS1BP7-201ENST00000522230 235 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 UBTFL10-201ENST00000528532 562 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AP002748.2-201ENST00000528671 348 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AC079600.2-201ENST00000550076 130 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 DUXAP1-201ENST00000556632 463 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AC068135.2-201ENST00000569293 1028 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.52□□□□□ -2.01
PKNOX1P55347 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.52□□□□□ -2.01
PKNOX1P55347 AC010620.2-201ENST00000600135 313 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 VN1R82P-201ENST00000601481 356 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AL136363.1-201ENST00000605349 337 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AL139418.1-201ENST00000613613 177 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AC004852.3-201ENST00000614131 326 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 AL161629.2-201ENST00000615347 275 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.52□□□□□ -2.01
PKNOX1P55347 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.52□□□□□ -2.01
PKNOX1P55347 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.52□□□□□ -2.01
PKNOX1P55347 AC006927.4-201ENST00000639187 543 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
PKNOX1P55347 DDX10P1-201ENST00000448545 1933 ntBASIC2.52□□□□□ -2.01
PKNOX1P55347 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.52□□□□□ -2.01
PKNOX1P55347 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.51□□□□□ -2.01
PKNOX1P55347 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PKNOX1P55347 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.51□□□□□ -2.01
PKNOX1P55347 SNORD46.1-201ENST00000364139 104 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 AL590084.2-201ENST00000401481 382 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 MTCO1P17-201ENST00000411522 491 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.51□□□□□ -2.01
PKNOX1P55347 AL513477.1-202ENST00000417061 214 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.51□□□□□ -2.01
PKNOX1P55347 AL714022.1-201ENST00000439897 151 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.51□□□□□ -2.01
PKNOX1P55347 TPT1P14-201ENST00000448018 505 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.51□□□□□ -2.01
PKNOX1P55347 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.51□□□□□ -2.01
PKNOX1P55347 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.51□□□□□ -2.01
PKNOX1P55347 MTND2P24-201ENST00000453434 806 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 AC116337.2-201ENST00000477662 156 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 AC011825.1-201ENST00000484967 388 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.51□□□□□ -2.01
PKNOX1P55347 AC135721.1-201ENST00000497954 479 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.51□□□□□ -2.01
PKNOX1P55347 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.51□□□□□ -2.01
PKNOX1P55347 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
PKNOX1P55347 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.51□□□□□ -2.01
PKNOX1P55347 RNA5SP216-201ENST00000516111 123 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 RNU6-1282P-201ENST00000516735 96 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PKNOX1P55347 OR5BN1P-201ENST00000532955 829 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.51□□□□□ -2.01
PKNOX1P55347 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.51□□□□□ -2.01
PKNOX1P55347 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
PKNOX1P55347 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.51□□□□□ -2.01
PKNOX1P55347 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.51□□□□□ -2.01
PKNOX1P55347 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.51□□□□□ -2.01
PKNOX1P55347 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.51□□□□□ -2.01
PKNOX1P55347 BNIP3P40-201ENST00000596017 556 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 AC012468.1-201ENST00000604888 430 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 TUG1_2.1-201ENST00000614234 87 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 AC013476.2-201ENST00000614456 459 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PKNOX1P55347 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PKNOX1P55347 AC026241.1-201ENST00000517873 2142 ntBASIC2.51□□□□□ -2.01
PKNOX1P55347 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PKNOX1P55347 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PKNOX1P55347 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PKNOX1P55347 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.5□□□□□ -2.01
PKNOX1P55347 AL360182.1-201ENST00000397433 468 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 AL109755.1-201ENST00000401791 649 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 AL356057.3-201ENST00000402607 340 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 MIR320C1-201ENST00000408566 88 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.5□□□□□ -2.01
PKNOX1P55347 AL365496.1-201ENST00000426885 215 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.5□□□□□ -2.01
PKNOX1P55347 SUMO1P4-201ENST00000429430 302 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 MTND1P32-201ENST00000433043 938 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 UBE2V1P13-201ENST00000436983 439 ntBASIC2.5□□□□□ -2.01
PKNOX1P55347 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms