Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RPS20P22-201ENST00000473700 357 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AC135721.1-201ENST00000497954 479 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.6□□□□□ -1.99
LIM2P55344 RNU6-1129P-201ENST00000515964 104 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.6□□□□□ -1.99
LIM2P55344 AC100870.1-201ENST00000522035 505 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.6□□□□□ -1.99
LIM2P55344 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.6□□□□□ -1.99
LIM2P55344 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.6□□□□□ -1.99
LIM2P55344 AC079600.2-201ENST00000550076 130 ntBASIC2.6□□□□□ -1.99
LIM2P55344 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.6□□□□□ -1.99
LIM2P55344 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LIM2P55344 EIF4BP1-201ENST00000554881 351 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AL355836.1-201ENST00000555951 870 ntBASIC2.6□□□□□ -1.99
LIM2P55344 OR4H12P-201ENST00000556269 907 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.6□□□□□ -1.99
LIM2P55344 MTATP6P24-201ENST00000576835 677 ntBASIC2.6□□□□□ -1.99
LIM2P55344 LARP7P3-201ENST00000579888 337 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.6□□□□□ -1.99
LIM2P55344 AL033523.1-201ENST00000605153 153 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AP003122.6-201ENST00000623831 495 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AC006386.2-201ENST00000624491 75 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AC012005.1-201ENST00000624575 75 ntBASIC2.6□□□□□ -1.99
LIM2P55344 SNORA50A-202ENST00000629536 136 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.6□□□□□ -1.99
LIM2P55344 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.6□□□□□ -1.99
LIM2P55344 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.6□□□□□ -1.99
LIM2P55344 AC010680.1-201ENST00000590024 3590 ntBASIC2.6□□□□□ -1.99
LIM2P55344 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.6□□□□□ -1.99
LIM2P55344 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.59□□□□□ -1.99
LIM2P55344 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
LIM2P55344 AL079305.1-201ENST00000623159 3008 ntBASIC2.59□□□□□ -1.99
LIM2P55344 CCT4P2-201ENST00000233836 1548 ntBASIC2.59□□□□□ -1.99
LIM2P55344 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.59□□□□□ -1.99
LIM2P55344 RNU1-112P-201ENST00000364401 164 ntBASIC2.59□□□□□ -1.99
LIM2P55344 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.59□□□□□ -1.99
LIM2P55344 MRPL50P2-201ENST00000416821 482 ntBASIC2.59□□□□□ -1.99
LIM2P55344 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
LIM2P55344 HSPE1P1-201ENST00000421494 318 ntBASIC2.59□□□□□ -1.99
LIM2P55344 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.59□□□□□ -1.99
LIM2P55344 AC109583.1-201ENST00000432156 268 ntBASIC2.59□□□□□ -1.99
LIM2P55344 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.59□□□□□ -1.99
LIM2P55344 LARP1BP3-201ENST00000437229 869 ntBASIC2.59□□□□□ -1.99
LIM2P55344 MTCYBP39-201ENST00000437562 491 ntBASIC2.59□□□□□ -1.99
LIM2P55344 AC105272.1-201ENST00000438604 198 ntBASIC2.59□□□□□ -1.99
LIM2P55344 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.59□□□□□ -1.99
LIM2P55344 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.59□□□□□ -1.99
LIM2P55344 AL831737.1-201ENST00000441288 271 ntBASIC2.59□□□□□ -1.99
LIM2P55344 MTCO3P45-201ENST00000443036 613 ntBASIC2.59□□□□□ -1.99
LIM2P55344 TPT1P14-201ENST00000448018 505 ntBASIC2.59□□□□□ -1.99
LIM2P55344 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.59□□□□□ -1.99
LIM2P55344 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.59□□□□□ -1.99
LIM2P55344 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LIM2P55344 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.59□□□□□ -1.99
LIM2P55344 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.59□□□□□ -1.99
LIM2P55344 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.59□□□□□ -1.99
LIM2P55344 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.59□□□□□ -1.99
LIM2P55344 RNU6-840P-201ENST00000517275 65 ntBASIC2.59□□□□□ -1.99
LIM2P55344 ATP5F1P5-201ENST00000526403 760 ntBASIC2.59□□□□□ -1.99
LIM2P55344 AC013828.2-201ENST00000532487 235 ntBASIC2.59□□□□□ -1.99
LIM2P55344 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.59□□□□□ -1.99
LIM2P55344 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.59□□□□□ -1.99
LIM2P55344 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.59□□□□□ -1.99
LIM2P55344 AC007954.1-201ENST00000554198 494 ntBASIC2.59□□□□□ -1.99
LIM2P55344 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.59□□□□□ -1.99
LIM2P55344 ACTR3BP3-201ENST00000565577 979 ntBASIC2.59□□□□□ -1.99
LIM2P55344 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.59□□□□□ -1.99
LIM2P55344 AMZ2P1-203ENST00000565833 850 ntBASIC2.59□□□□□ -1.99
LIM2P55344 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.59□□□□□ -1.99
LIM2P55344 MIR4307-201ENST00000582802 84 ntBASIC2.59□□□□□ -1.99
LIM2P55344 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.59□□□□□ -1.99
LIM2P55344 AC013553.2-201ENST00000604244 589 ntBASIC2.59□□□□□ -1.99
LIM2P55344 AC008277.2-201ENST00000605196 797 ntBASIC2.59□□□□□ -1.99
LIM2P55344 AL160281.1-201ENST00000605307 311 ntBASIC2.59□□□□□ -1.99
LIM2P55344 AC063944.3-201ENST00000609969 533 ntBASIC2.59□□□□□ -1.99
LIM2P55344 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LIM2P55344 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.59□□□□□ -1.99
LIM2P55344 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.59□□□□□ -1.99
LIM2P55344 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LIM2P55344 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.58□□□□□ -2
LIM2P55344 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
LIM2P55344 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.58□□□□□ -2
LIM2P55344 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.58□□□□□ -2
LIM2P55344 AL512633.1-201ENST00000399931 655 ntBASIC2.58□□□□□ -2
LIM2P55344 TXNP7-201ENST00000406296 293 ntBASIC2.58□□□□□ -2
LIM2P55344 AC107081.1-201ENST00000414975 361 ntBASIC2.58□□□□□ -2
LIM2P55344 SPA17P1-201ENST00000416656 452 ntBASIC2.58□□□□□ -2
LIM2P55344 RPS27AP14-201ENST00000422868 454 ntBASIC2.58□□□□□ -2
LIM2P55344 MTND4P20-201ENST00000424125 869 ntBASIC2.58□□□□□ -2
LIM2P55344 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.58□□□□□ -2
LIM2P55344 USP12PX-201ENST00000432383 1057 ntBASIC2.58□□□□□ -2
LIM2P55344 AC112220.1-201ENST00000434628 355 ntBASIC2.58□□□□□ -2
LIM2P55344 TRIM60P18-201ENST00000441518 828 ntBASIC2.58□□□□□ -2
LIM2P55344 AC025750.2-201ENST00000442609 450 ntBASIC2.58□□□□□ -2
LIM2P55344 MTND5P2-201ENST00000442927 1142 ntBASIC2.58□□□□□ -2
LIM2P55344 RPL7P36-201ENST00000444633 681 ntBASIC2.58□□□□□ -2
LIM2P55344 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.58□□□□□ -2
LIM2P55344 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.58□□□□□ -2
LIM2P55344 MRPL50P4-201ENST00000446432 475 ntBASIC2.58□□□□□ -2
LIM2P55344 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms