Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AC008267.5-201ENST00000424928 265 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 Z82205.1-201ENST00000428456 297 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 TIMM9P3-201ENST00000428659 274 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN1P54253 CYCSP32-201ENST00000440548 321 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 MRPL50P4-201ENST00000446432 475 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 C1DP4-201ENST00000455429 424 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 RPL36AP13-201ENST00000457490 317 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN1P54253 HMGB3P17-201ENST00000504195 649 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 AC114797.1-201ENST00000514003 728 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 MTCO2P24-201ENST00000515611 426 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 AC026403.1-201ENST00000518938 295 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN1P54253 AC018630.1-201ENST00000541376 925 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN1P54253 AC123904.2-201ENST00000548059 300 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.24□□□□□ -1.73
ATXN1P54253 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.24□□□□□ -1.73
ATXN1P54253 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.24□□□□□ -1.73
ATXN1P54253 AL451044.1-201ENST00000604867 238 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 AC016925.2-201ENST00000605108 242 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 BNIP3P10-201ENST00000605360 577 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 AC121334.2-201ENST00000605387 271 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 AC011816.2-201ENST00000607089 556 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 AC092807.2-201ENST00000609367 243 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.24□□□□□ -1.73
ATXN1P54253 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.24□□□□□ -1.73
ATXN1P54253 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATXN1P54253 USP8P1-201ENST00000494673 3183 ntBASIC4.24□□□□□ -1.73
ATXN1P54253 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN1P54253 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN1P54253 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
ATXN1P54253 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN1P54253 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN1P54253 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN1P54253 Y_RNA.31-201ENST00000362574 102 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 SNORD56.2-201ENST00000363242 71 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 RNA5SP72-201ENST00000364442 117 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 RNA5SP235-201ENST00000365411 114 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 SNORD42.2-201ENST00000365570 69 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
ATXN1P54253 RNU2-15P-201ENST00000410692 191 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 AC127391.1-201ENST00000411737 98 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.23□□□□□ -1.73
ATXN1P54253 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.23□□□□□ -1.73
ATXN1P54253 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN1P54253 Y_RNA.632-201ENST00000459189 102 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 MTATP8P1-201ENST00000467115 207 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.23□□□□□ -1.73
ATXN1P54253 AL163540.1-201ENST00000485382 386 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.23□□□□□ -1.73
ATXN1P54253 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.23□□□□□ -1.73
ATXN1P54253 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.23□□□□□ -1.73
ATXN1P54253 RNU6-27P-201ENST00000516146 107 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 AC109635.4-202ENST00000531666 412 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN1P54253 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.23□□□□□ -1.73
ATXN1P54253 AL121603.1-201ENST00000553815 142 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 SCOCP1-201ENST00000554676 349 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 AL845331.3-202ENST00000562856 261 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 AC025627.2-201ENST00000576220 160 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.23□□□□□ -1.73
ATXN1P54253 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.23□□□□□ -1.73
ATXN1P54253 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.23□□□□□ -1.73
ATXN1P54253 BX664608.1-201ENST00000610519 487 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 AL133173.2-201ENST00000614270 90 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 uc_338.32-201ENST00000615087 172 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 AL596245.1-201ENST00000618994 362 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 AC015967.1-201ENST00000619893 476 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 AC090617.10-201ENST00000624308 134 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ATXN1P54253 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN1P54253 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.23□□□□□ -1.73
ATXN1P54253 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN1P54253 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
ATXN1P54253 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.23□□□□□ -1.73
ATXN1P54253 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ATXN1P54253 AC027287.1-201ENST00000553115 1453 ntBASIC4.23□□□□□ -1.73
ATXN1P54253 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.22□□□□□ -1.73
ATXN1P54253 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.22□□□□□ -1.73
ATXN1P54253 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN1P54253 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN1P54253 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN1P54253 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
ATXN1P54253 AC244517.1-201ENST00000606030 2086 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.22□□□□□ -1.73
ATXN1P54253 AC004925.1-201ENST00000624256 2706 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 Y_RNA.1-201ENST00000352915 104 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 RNU6-97P-201ENST00000363387 104 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 Y_RNA.128-201ENST00000363391 112 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 Y_RNA.188-201ENST00000363952 111 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 Y_RNA.231-201ENST00000364358 102 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ATXN1P54253 RNU6-1062P-201ENST00000383908 107 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 MIR3074-201ENST00000384885 81 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 MT-TG-201ENST00000387429 68 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 RPL23AP32-201ENST00000395315 459 ntBASIC4.22□□□□□ -1.73
ATXN1P54253 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms