Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.27□□□□□ -1.89
LIMK1P53667 SNRPGP6-201ENST00000451124 220 ntBASIC3.27□□□□□ -1.89
LIMK1P53667 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.27□□□□□ -1.89
LIMK1P53667 BET1P1-201ENST00000482276 359 ntBASIC3.27□□□□□ -1.89
LIMK1P53667 RNA5SP356-201ENST00000515972 94 ntBASIC3.27□□□□□ -1.89
LIMK1P53667 AC025881.1-201ENST00000518851 512 ntBASIC3.27□□□□□ -1.89
LIMK1P53667 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.27□□□□□ -1.89
LIMK1P53667 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
LIMK1P53667 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.27□□□□□ -1.89
LIMK1P53667 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.27□□□□□ -1.89
LIMK1P53667 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.27□□□□□ -1.89
LIMK1P53667 H3F3AP1-201ENST00000559984 334 ntBASIC3.27□□□□□ -1.89
LIMK1P53667 RPL23AP84-201ENST00000571193 464 ntBASIC3.27□□□□□ -1.89
LIMK1P53667 AP000254.1-201ENST00000609934 520 ntBASIC3.27□□□□□ -1.89
LIMK1P53667 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LIMK1P53667 AC019226.2-201ENST00000625973 424 ntBASIC3.27□□□□□ -1.89
LIMK1P53667 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.27□□□□□ -1.89
LIMK1P53667 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.27□□□□□ -1.89
LIMK1P53667 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LIMK1P53667 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LIMK1P53667 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LIMK1P53667 OR4G2P-202ENST00000641004 1759 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
LIMK1P53667 DYNLT3P1-201ENST00000378574 347 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
LIMK1P53667 RPL7P8-201ENST00000411964 730 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.26□□□□□ -1.89
LIMK1P53667 AL590383.1-201ENST00000428602 75 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 SETP8-201ENST00000435341 628 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.26□□□□□ -1.89
LIMK1P53667 LARP1BP3-201ENST00000437229 869 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 UBE2D3P4-201ENST00000441973 436 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 KATNBL1P6-201ENST00000453433 915 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.26□□□□□ -1.89
LIMK1P53667 RN7SL863P-201ENST00000462370 296 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 RPL23AP41-201ENST00000484754 458 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LIMK1P53667 AC009901.1-201ENST00000506703 541 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.26□□□□□ -1.89
LIMK1P53667 AC104027.1-201ENST00000521887 300 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.26□□□□□ -1.89
LIMK1P53667 AC007834.2-201ENST00000536310 343 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.26□□□□□ -1.89
LIMK1P53667 OSBPL9P5-201ENST00000542581 171 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.26□□□□□ -1.89
LIMK1P53667 HIGD1AP1-201ENST00000550979 275 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
LIMK1P53667 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.26□□□□□ -1.89
LIMK1P53667 AC109446.2-201ENST00000567872 497 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.26□□□□□ -1.89
LIMK1P53667 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.26□□□□□ -1.89
LIMK1P53667 ROCK1P1-201ENST00000573767 549 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.26□□□□□ -1.89
LIMK1P53667 AP000403.1-201ENST00000603349 851 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LIMK1P53667 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.26□□□□□ -1.89
LIMK1P53667 AC093838.1-201ENST00000613014 469 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.26□□□□□ -1.89
LIMK1P53667 AC027807.2-201ENST00000616099 408 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.26□□□□□ -1.89
LIMK1P53667 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LIMK1P53667 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LIMK1P53667 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
LIMK1P53667 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.26□□□□□ -1.89
LIMK1P53667 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.26□□□□□ -1.89
LIMK1P53667 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.25□□□□□ -1.89
LIMK1P53667 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.25□□□□□ -1.89
LIMK1P53667 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
LIMK1P53667 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LIMK1P53667 AL138713.1-201ENST00000624026 2130 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LIMK1P53667 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
LIMK1P53667 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LIMK1P53667 Y_RNA.97-201ENST00000363094 102 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.25□□□□□ -1.89
LIMK1P53667 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.25□□□□□ -1.89
LIMK1P53667 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.25□□□□□ -1.89
LIMK1P53667 AL645937.1-202ENST00000421799 937 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 HMGN2P30-201ENST00000423237 256 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 AC109583.1-201ENST00000432156 268 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.25□□□□□ -1.89
LIMK1P53667 AC092573.2-201ENST00000434546 243 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.25□□□□□ -1.89
LIMK1P53667 FTH1P1-201ENST00000437933 532 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 ELOCP30-201ENST00000447108 299 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.25□□□□□ -1.89
LIMK1P53667 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.25□□□□□ -1.89
LIMK1P53667 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LIMK1P53667 AC055855.1-201ENST00000489563 579 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 RNU6-56P-201ENST00000516986 93 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 MTCO1P47-201ENST00000523889 1271 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 AP000857.1-201ENST00000532151 543 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 AC026333.2-201ENST00000542164 106 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 AL355836.1-201ENST00000555951 870 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 HMGB1P14-201ENST00000557424 591 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 AC091489.2-201ENST00000566263 604 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 MIR3915-201ENST00000578518 97 ntBASIC3.25□□□□□ -1.89
LIMK1P53667 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.25□□□□□ -1.89
LIMK1P53667 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms