Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR153-1-201ENST00000384914 90 ntBASIC3.88□□□□□ -1.79
COPB1P53618 MIR1-2-201ENST00000384961 85 ntBASIC3.88□□□□□ -1.79
COPB1P53618 MIR1250-201ENST00000408098 113 ntBASIC3.88□□□□□ -1.79
COPB1P53618 RNU6-55P-201ENST00000411092 107 ntBASIC3.88□□□□□ -1.79
COPB1P53618 RN7SKP53-201ENST00000411337 315 ntBASIC3.88□□□□□ -1.79
COPB1P53618 RNU6-954P-201ENST00000411355 107 ntBASIC3.88□□□□□ -1.79
COPB1P53618 MRPL50P2-201ENST00000416821 482 ntBASIC3.88□□□□□ -1.79
COPB1P53618 ZNF863P-201ENST00000426746 417 ntBASIC3.88□□□□□ -1.79
COPB1P53618 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.88□□□□□ -1.79
COPB1P53618 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.88□□□□□ -1.79
COPB1P53618 USP9YP7-201ENST00000436723 430 ntBASIC3.88□□□□□ -1.79
COPB1P53618 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.88□□□□□ -1.79
COPB1P53618 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.88□□□□□ -1.79
COPB1P53618 AL357552.1-201ENST00000445254 415 ntBASIC3.88□□□□□ -1.79
COPB1P53618 AC079781.2-201ENST00000446424 169 ntBASIC3.88□□□□□ -1.79
COPB1P53618 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.88□□□□□ -1.79
COPB1P53618 USP9YP32-201ENST00000452432 430 ntBASIC3.88□□□□□ -1.79
COPB1P53618 RN7SL594P-201ENST00000470590 287 ntBASIC3.88□□□□□ -1.79
COPB1P53618 ST13P14-201ENST00000474095 734 ntBASIC3.88□□□□□ -1.79
COPB1P53618 NIPA2P2-201ENST00000496376 1083 ntBASIC3.88□□□□□ -1.79
COPB1P53618 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.88□□□□□ -1.79
COPB1P53618 RNU6-507P-201ENST00000516045 100 ntBASIC3.88□□□□□ -1.79
COPB1P53618 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.88□□□□□ -1.79
COPB1P53618 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.88□□□□□ -1.79
COPB1P53618 AP000857.1-201ENST00000532151 543 ntBASIC3.88□□□□□ -1.79
COPB1P53618 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.88□□□□□ -1.79
COPB1P53618 AL133271.1-201ENST00000538229 291 ntBASIC3.88□□□□□ -1.79
COPB1P53618 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.88□□□□□ -1.79
COPB1P53618 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.88□□□□□ -1.79
COPB1P53618 AL133153.1-201ENST00000557756 303 ntBASIC3.88□□□□□ -1.79
COPB1P53618 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.88□□□□□ -1.79
COPB1P53618 AC034105.3-201ENST00000565294 442 ntBASIC3.88□□□□□ -1.79
COPB1P53618 HMGB1P6-201ENST00000569046 646 ntBASIC3.88□□□□□ -1.79
COPB1P53618 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.88□□□□□ -1.79
COPB1P53618 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.88□□□□□ -1.79
COPB1P53618 AC005730.3-201ENST00000583067 366 ntBASIC3.88□□□□□ -1.79
COPB1P53618 AC098848.2-201ENST00000588023 330 ntBASIC3.88□□□□□ -1.79
COPB1P53618 AP001429.1-201ENST00000602568 530 ntBASIC3.88□□□□□ -1.79
COPB1P53618 BNIP3P9-201ENST00000603714 553 ntBASIC3.88□□□□□ -1.79
COPB1P53618 Z84480.1-201ENST00000605131 311 ntBASIC3.88□□□□□ -1.79
COPB1P53618 AC010680.4-201ENST00000605334 543 ntBASIC3.88□□□□□ -1.79
COPB1P53618 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.88□□□□□ -1.79
COPB1P53618 AC004908.2-201ENST00000609090 574 ntBASIC3.88□□□□□ -1.79
COPB1P53618 AC112200.1-201ENST00000625015 234 ntBASIC3.88□□□□□ -1.79
COPB1P53618 MIR3662-201ENST00000637030 95 ntBASIC3.88□□□□□ -1.79
COPB1P53618 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
COPB1P53618 AL161912.2-201ENST00000565707 3007 ntBASIC3.88□□□□□ -1.79
COPB1P53618 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COPB1P53618 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
COPB1P53618 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.88□□□□□ -1.79
COPB1P53618 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COPB1P53618 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COPB1P53618 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
COPB1P53618 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COPB1P53618 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COPB1P53618 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COPB1P53618 CKAP2P1-201ENST00000555477 2049 ntBASIC3.87□□□□□ -1.79
COPB1P53618 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
COPB1P53618 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
COPB1P53618 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
COPB1P53618 Y_RNA.22-201ENST00000362492 102 ntBASIC3.87□□□□□ -1.79
COPB1P53618 RNU6-1078P-201ENST00000364522 103 ntBASIC3.87□□□□□ -1.79
COPB1P53618 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
COPB1P53618 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COPB1P53618 RN7SKP156-201ENST00000410308 342 ntBASIC3.87□□□□□ -1.79
COPB1P53618 RNU2-62P-201ENST00000410868 191 ntBASIC3.87□□□□□ -1.79
COPB1P53618 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.87□□□□□ -1.79
COPB1P53618 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.87□□□□□ -1.79
COPB1P53618 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COPB1P53618 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.87□□□□□ -1.79
COPB1P53618 AC016691.1-201ENST00000441321 413 ntBASIC3.87□□□□□ -1.79
COPB1P53618 CALM1P1-201ENST00000442082 433 ntBASIC3.87□□□□□ -1.79
COPB1P53618 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.87□□□□□ -1.79
COPB1P53618 RNU7-59P-201ENST00000459101 61 ntBASIC3.87□□□□□ -1.79
COPB1P53618 AC010401.1-201ENST00000463867 348 ntBASIC3.87□□□□□ -1.79
COPB1P53618 RPL7L1P8-201ENST00000469911 741 ntBASIC3.87□□□□□ -1.79
COPB1P53618 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.87□□□□□ -1.79
COPB1P53618 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.87□□□□□ -1.79
COPB1P53618 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.87□□□□□ -1.79
COPB1P53618 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.87□□□□□ -1.79
COPB1P53618 HSPD1P15-201ENST00000505573 1122 ntBASIC3.87□□□□□ -1.79
COPB1P53618 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.87□□□□□ -1.79
COPB1P53618 MIR2276-201ENST00000516886 89 ntBASIC3.87□□□□□ -1.79
COPB1P53618 RNU6-798P-201ENST00000516912 103 ntBASIC3.87□□□□□ -1.79
COPB1P53618 RANP9-201ENST00000519957 271 ntBASIC3.87□□□□□ -1.79
COPB1P53618 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.87□□□□□ -1.79
COPB1P53618 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.87□□□□□ -1.79
COPB1P53618 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.87□□□□□ -1.79
COPB1P53618 CR383656.7-201ENST00000548164 174 ntBASIC3.87□□□□□ -1.79
COPB1P53618 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.87□□□□□ -1.79
COPB1P53618 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.87□□□□□ -1.79
COPB1P53618 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.87□□□□□ -1.79
COPB1P53618 AC104985.2-201ENST00000620598 500 ntBASIC3.87□□□□□ -1.79
COPB1P53618 YWHAEP7-203ENST00000622054 312 ntBASIC3.87□□□□□ -1.79
COPB1P53618 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.87□□□□□ -1.79
COPB1P53618 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.87□□□□□ -1.79
COPB1P53618 AC024614.3-201ENST00000637860 256 ntBASIC3.87□□□□□ -1.79
COPB1P53618 AC119674.1-207ENST00000641355 633 ntBASIC3.87□□□□□ -1.79
COPB1P53618 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
COPB1P53618 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms