Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.61□□□□□ -2.15
SRP9P49458 IFNA20P-201ENST00000436840 528 ntBASIC1.61□□□□□ -2.15
SRP9P49458 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.61□□□□□ -2.15
SRP9P49458 MTND1P33-201ENST00000446251 917 ntBASIC1.61□□□□□ -2.15
SRP9P49458 RPL21P134-201ENST00000453468 483 ntBASIC1.61□□□□□ -2.15
SRP9P49458 AC107032.1-201ENST00000485945 480 ntBASIC1.61□□□□□ -2.15
SRP9P49458 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.61□□□□□ -2.15
SRP9P49458 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SRP9P49458 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.61□□□□□ -2.15
SRP9P49458 AL359273.1-201ENST00000510918 627 ntBASIC1.61□□□□□ -2.15
SRP9P49458 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.61□□□□□ -2.15
SRP9P49458 AP000873.5-201ENST00000533906 236 ntBASIC1.61□□□□□ -2.15
SRP9P49458 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.61□□□□□ -2.15
SRP9P49458 AC007375.1-201ENST00000554513 578 ntBASIC1.61□□□□□ -2.15
SRP9P49458 AC027807.1-201ENST00000559921 996 ntBASIC1.61□□□□□ -2.15
SRP9P49458 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.61□□□□□ -2.15
SRP9P49458 DEFB122-202ENST00000569013 197 ntBASIC1.61□□□□□ -2.15
SRP9P49458 AC024614.2-201ENST00000577584 372 ntBASIC1.61□□□□□ -2.15
SRP9P49458 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.61□□□□□ -2.15
SRP9P49458 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.61□□□□□ -2.15
SRP9P49458 AC106052.1-201ENST00000608029 497 ntBASIC1.61□□□□□ -2.15
SRP9P49458 AC103710.2-201ENST00000609912 942 ntBASIC1.61□□□□□ -2.15
SRP9P49458 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.61□□□□□ -2.15
SRP9P49458 OR5H6-203ENST00000642105 978 ntBASIC1.61□□□□□ -2.15
SRP9P49458 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
SRP9P49458 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SRP9P49458 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
SRP9P49458 AC002543.1-201ENST00000299783 1954 ntBASIC1.6□□□□□ -2.15
SRP9P49458 RNA5SP125-201ENST00000364843 120 ntBASIC1.6□□□□□ -2.15
SRP9P49458 SNORD48-201ENST00000364953 64 ntBASIC1.6□□□□□ -2.15
SRP9P49458 RNU6-921P-201ENST00000384361 107 ntBASIC1.6□□□□□ -2.15
SRP9P49458 MIR649-201ENST00000384843 97 ntBASIC1.6□□□□□ -2.15
SRP9P49458 MIR147B-201ENST00000390185 80 ntBASIC1.6□□□□□ -2.15
SRP9P49458 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.6□□□□□ -2.15
SRP9P49458 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.6□□□□□ -2.15
SRP9P49458 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.6□□□□□ -2.15
SRP9P49458 AC092685.1-201ENST00000447960 1243 ntBASIC1.6□□□□□ -2.15
SRP9P49458 RPL23AP3-201ENST00000453844 468 ntBASIC1.6□□□□□ -2.15
SRP9P49458 snoU13.26-201ENST00000459452 105 ntBASIC1.6□□□□□ -2.15
SRP9P49458 UBL5P3-201ENST00000475112 231 ntBASIC1.6□□□□□ -2.15
SRP9P49458 AC093281.2-201ENST00000510153 597 ntBASIC1.6□□□□□ -2.15
SRP9P49458 AC107393.1-201ENST00000512403 346 ntBASIC1.6□□□□□ -2.15
SRP9P49458 RNU5F-8P-201ENST00000515941 111 ntBASIC1.6□□□□□ -2.15
SRP9P49458 AC118273.2-201ENST00000532092 465 ntBASIC1.6□□□□□ -2.15
SRP9P49458 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.6□□□□□ -2.15
SRP9P49458 HSBP1P1-201ENST00000555205 166 ntBASIC1.6□□□□□ -2.15
SRP9P49458 MIR4419B-201ENST00000577260 68 ntBASIC1.6□□□□□ -2.15
SRP9P49458 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.6□□□□□ -2.15
SRP9P49458 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.6□□□□□ -2.15
SRP9P49458 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.6□□□□□ -2.15
SRP9P49458 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SRP9P49458 AC093838.1-201ENST00000613014 469 ntBASIC1.6□□□□□ -2.15
SRP9P49458 AC020658.4-201ENST00000613987 684 ntBASIC1.6□□□□□ -2.15
SRP9P49458 AC073592.7-201ENST00000623659 507 ntBASIC1.6□□□□□ -2.15
SRP9P49458 AC026634.1-201ENST00000634369 198 ntBASIC1.6□□□□□ -2.15
SRP9P49458 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.6□□□□□ -2.15
SRP9P49458 AC130650.2-201ENST00000618736 2403 ntBASIC1.6□□□□□ -2.15
SRP9P49458 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SRP9P49458 AC008555.8-201ENST00000623602 2168 ntBASIC1.59□□□□□ -2.15
SRP9P49458 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
SRP9P49458 MIR1261-201ENST00000408659 82 ntBASIC1.59□□□□□ -2.15
SRP9P49458 PGBD4P6-201ENST00000421501 610 ntBASIC1.59□□□□□ -2.15
SRP9P49458 AL009174.1-201ENST00000426577 416 ntBASIC1.59□□□□□ -2.15
SRP9P49458 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.59□□□□□ -2.15
SRP9P49458 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.59□□□□□ -2.15
SRP9P49458 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.59□□□□□ -2.15
SRP9P49458 AC016691.1-201ENST00000441321 413 ntBASIC1.59□□□□□ -2.15
SRP9P49458 RAC1P7-201ENST00000445367 377 ntBASIC1.59□□□□□ -2.15
SRP9P49458 AC005297.2-201ENST00000450430 606 ntBASIC1.59□□□□□ -2.15
SRP9P49458 snoU13.15-201ENST00000459407 104 ntBASIC1.59□□□□□ -2.15
SRP9P49458 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.59□□□□□ -2.15
SRP9P49458 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.59□□□□□ -2.15
SRP9P49458 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.15
SRP9P49458 AC025181.1-201ENST00000477507 416 ntBASIC1.59□□□□□ -2.15
SRP9P49458 VPS26AP1-201ENST00000483197 979 ntBASIC1.59□□□□□ -2.15
SRP9P49458 AC034222.1-201ENST00000494052 532 ntBASIC1.59□□□□□ -2.15
SRP9P49458 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.59□□□□□ -2.15
SRP9P49458 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.59□□□□□ -2.15
SRP9P49458 RNU6-27P-201ENST00000516146 107 ntBASIC1.59□□□□□ -2.15
SRP9P49458 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.59□□□□□ -2.15
SRP9P49458 AP005639.2-201ENST00000527592 928 ntBASIC1.59□□□□□ -2.15
SRP9P49458 OR5AL2P-201ENST00000532185 920 ntBASIC1.59□□□□□ -2.15
SRP9P49458 EEF1B2P4-201ENST00000551398 348 ntBASIC1.59□□□□□ -2.15
SRP9P49458 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.59□□□□□ -2.15
SRP9P49458 CBX3P2-202ENST00000583365 535 ntBASIC1.59□□□□□ -2.15
SRP9P49458 AC068790.3-201ENST00000602988 553 ntBASIC1.59□□□□□ -2.15
SRP9P49458 RPP40P2-201ENST00000603596 712 ntBASIC1.59□□□□□ -2.15
SRP9P49458 VN1R9P-201ENST00000614184 867 ntBASIC1.59□□□□□ -2.15
SRP9P49458 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.59□□□□□ -2.15
SRP9P49458 AC092608.3-201ENST00000625017 386 ntBASIC1.59□□□□□ -2.15
SRP9P49458 AC119674.1-220ENST00000641502 1048 ntBASIC1.59□□□□□ -2.15
SRP9P49458 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.16
SRP9P49458 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.59□□□□□ -2.16
SRP9P49458 MTND5P31-201ENST00000419366 1374 ntBASIC1.59□□□□□ -2.16
SRP9P49458 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SRP9P49458 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SRP9P49458 RNU6-1159P-201ENST00000362933 107 ntBASIC1.58□□□□□ -2.16
SRP9P49458 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SRP9P49458 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
SRP9P49458 MIR325-201ENST00000385260 98 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms