Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC018754.1-201ENST00000607486 925 ntBASIC1.03□□□□□ -2.24
HTTP42858 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HTTP42858 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HTTP42858 ZNF37BP-203ENST00000452306 1352 ntBASIC1.03□□□□□ -2.24
HTTP42858 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
HTTP42858 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.03□□□□□ -2.24
HTTP42858 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.03□□□□□ -2.24
HTTP42858 PABPC1P7-201ENST00000413177 1513 ntBASIC1.03□□□□□ -2.25
HTTP42858 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
HTTP42858 SUMO1P4-201ENST00000429430 302 ntBASIC1.02□□□□□ -2.25
HTTP42858 IPO7P1-201ENST00000442031 636 ntBASIC1.02□□□□□ -2.25
HTTP42858 BZW1P2-201ENST00000473537 826 ntBASIC1.02□□□□□ -2.25
HTTP42858 RPL37P25-201ENST00000507308 276 ntBASIC1.02□□□□□ -2.25
HTTP42858 AL158032.1-201ENST00000605401 106 ntBASIC1.02□□□□□ -2.25
HTTP42858 RNY4P3-201ENST00000365254 95 ntBASIC1.02□□□□□ -2.25
HTTP42858 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.02□□□□□ -2.25
HTTP42858 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
HTTP42858 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.02□□□□□ -2.25
HTTP42858 AC015922.2-201ENST00000435593 184 ntBASIC1.02□□□□□ -2.25
HTTP42858 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.02□□□□□ -2.25
HTTP42858 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.02□□□□□ -2.25
HTTP42858 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.02□□□□□ -2.25
HTTP42858 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HTTP42858 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.02□□□□□ -2.25
HTTP42858 RNA5SP498-201ENST00000411342 120 ntBASIC1.02□□□□□ -2.25
HTTP42858 PSPHP1-201ENST00000450062 261 ntBASIC1.02□□□□□ -2.25
HTTP42858 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.02□□□□□ -2.25
HTTP42858 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.02□□□□□ -2.25
HTTP42858 AC090617.7-201ENST00000623952 126 ntBASIC1.02□□□□□ -2.25
HTTP42858 XIST_intron.1-201ENST00000619444 68 ntBASIC1.01□□□□□ -2.25
HTTP42858 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.01□□□□□ -2.25
HTTP42858 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.01□□□□□ -2.25
HTTP42858 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
HTTP42858 SNORA62.1-201ENST00000364287 154 ntBASIC1.01□□□□□ -2.25
HTTP42858 RNU4-52P-201ENST00000384209 138 ntBASIC1.01□□□□□ -2.25
HTTP42858 RNU6-17P-201ENST00000384245 107 ntBASIC1.01□□□□□ -2.25
HTTP42858 RNU6-18P-201ENST00000384527 107 ntBASIC1.01□□□□□ -2.25
HTTP42858 MIR936-201ENST00000401264 98 ntBASIC1.01□□□□□ -2.25
HTTP42858 AL591704.2-201ENST00000421658 181 ntBASIC1.01□□□□□ -2.25
HTTP42858 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.01□□□□□ -2.25
HTTP42858 HMGB3P30-201ENST00000457863 606 ntBASIC1.01□□□□□ -2.25
HTTP42858 RPL31P58-201ENST00000469001 379 ntBASIC1.01□□□□□ -2.25
HTTP42858 AC012170.1-201ENST00000495139 359 ntBASIC1.01□□□□□ -2.25
HTTP42858 AC087588.2-201ENST00000617667 426 ntBASIC1.01□□□□□ -2.25
HTTP42858 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HTTP42858 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.01□□□□□ -2.25
HTTP42858 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
HTTP42858 SSXP10-201ENST00000402595 565 ntBASIC1□□□□□ -2.25
HTTP42858 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1□□□□□ -2.25
HTTP42858 RNU6-56P-201ENST00000516986 93 ntBASIC1□□□□□ -2.25
HTTP42858 AC068620.4-201ENST00000636730 1182 ntBASIC1□□□□□ -2.25
HTTP42858 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
HTTP42858 SNRPGP3-201ENST00000469405 227 ntBASIC1□□□□□ -2.25
HTTP42858 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1□□□□□ -2.25
HTTP42858 RNU6-666P-201ENST00000363499 107 ntBASIC1□□□□□ -2.25
HTTP42858 MIR591-201ENST00000385290 95 ntBASIC1□□□□□ -2.25
HTTP42858 AC244035.1-201ENST00000430042 390 ntBASIC1□□□□□ -2.25
HTTP42858 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1□□□□□ -2.25
HTTP42858 AC090096.1-201ENST00000489168 390 ntBASIC1□□□□□ -2.25
HTTP42858 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
HTTP42858 AC004808.1-201ENST00000627671 721 ntBASIC1□□□□□ -2.25
HTTP42858 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
HTTP42858 Y_RNA.48-201ENST00000362710 103 ntBASIC0.99□□□□□ -2.25
HTTP42858 SNORA48.9-201ENST00000516419 162 ntBASIC0.99□□□□□ -2.25
HTTP42858 OR6C7P-201ENST00000547875 934 ntBASIC0.99□□□□□ -2.25
HTTP42858 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.99□□□□□ -2.25
HTTP42858 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC0.99□□□□□ -2.25
HTTP42858 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
HTTP42858 Y_RNA.549-201ENST00000384657 102 ntBASIC0.99□□□□□ -2.25
HTTP42858 XKRYP6-201ENST00000440468 1116 ntBASIC0.99□□□□□ -2.25
HTTP42858 XKRYP3-201ENST00000442113 1116 ntBASIC0.99□□□□□ -2.25
HTTP42858 ARL5AP2-201ENST00000444698 533 ntBASIC0.99□□□□□ -2.25
HTTP42858 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.99□□□□□ -2.25
HTTP42858 AC048347.1-201ENST00000624621 427 ntBASIC0.99□□□□□ -2.25
HTTP42858 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.98□□□□□ -2.25
HTTP42858 AC012497.1-201ENST00000429392 575 ntBASIC0.98□□□□□ -2.25
HTTP42858 AC234775.1-201ENST00000454247 670 ntBASIC0.98□□□□□ -2.25
HTTP42858 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC0.98□□□□□ -2.25
HTTP42858 MRPS33P3-201ENST00000513456 322 ntBASIC0.98□□□□□ -2.25
HTTP42858 AC138473.1-201ENST00000605717 526 ntBASIC0.98□□□□□ -2.25
HTTP42858 SNORA79B-201ENST00000410557 148 ntBASIC0.98□□□□□ -2.25
HTTP42858 XIST-201ENST00000416330 750 ntTSL 2 BASIC0.98□□□□□ -2.25
HTTP42858 AL360221.1-201ENST00000445989 335 ntBASIC0.98□□□□□ -2.25
HTTP42858 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.98□□□□□ -2.25
HTTP42858 SEM1P1-201ENST00000506694 209 ntBASIC0.98□□□□□ -2.25
HTTP42858 AP005597.4-201ENST00000526762 229 ntBASIC0.98□□□□□ -2.25
HTTP42858 AP000254.1-201ENST00000609934 520 ntBASIC0.98□□□□□ -2.25
HTTP42858 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.98□□□□□ -2.25
HTTP42858 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
HTTP42858 MIR1912-201ENST00000410389 80 ntBASIC0.98□□□□□ -2.25
HTTP42858 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.98□□□□□ -2.25
HTTP42858 AC146507.1-201ENST00000468335 354 ntBASIC0.98□□□□□ -2.25
HTTP42858 AL132857.1-201ENST00000555180 708 ntBASIC0.98□□□□□ -2.25
HTTP42858 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
HTTP42858 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.97□□□□□ -2.25
HTTP42858 RPL21P90-201ENST00000415692 466 ntBASIC0.97□□□□□ -2.25
HTTP42858 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.97□□□□□ -2.25
HTTP42858 AK3P2-201ENST00000507976 429 ntBASIC0.97□□□□□ -2.25
HTTP42858 RNU6ATAC39P-201ENST00000516309 149 ntBASIC0.97□□□□□ -2.25
HTTP42858 AP002967.1-201ENST00000624203 539 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms