Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.13□□□□□ -2.07
COL18A1P39060 MTATP6P4-201ENST00000427725 675 ntBASIC2.13□□□□□ -2.07
COL18A1P39060 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.13□□□□□ -2.07
COL18A1P39060 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.13□□□□□ -2.07
COL18A1P39060 HSFY3P-201ENST00000444242 1191 ntBASIC2.13□□□□□ -2.07
COL18A1P39060 AL109741.2-201ENST00000455561 343 ntBASIC2.13□□□□□ -2.07
COL18A1P39060 MTND2P30-201ENST00000456663 382 ntBASIC2.13□□□□□ -2.07
COL18A1P39060 AL121594.1-201ENST00000475906 575 ntBASIC2.13□□□□□ -2.07
COL18A1P39060 OR52A4P-202ENST00000481634 799 ntBASIC2.13□□□□□ -2.07
COL18A1P39060 RPS15AP36-201ENST00000492022 382 ntBASIC2.13□□□□□ -2.07
COL18A1P39060 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
COL18A1P39060 ARL2BPP5-201ENST00000523141 481 ntBASIC2.13□□□□□ -2.07
COL18A1P39060 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.13□□□□□ -2.07
COL18A1P39060 MIR4452-201ENST00000583004 71 ntBASIC2.13□□□□□ -2.07
COL18A1P39060 GAS5-AS1-201ENST00000602767 694 ntBASIC2.13□□□□□ -2.07
COL18A1P39060 MIR6779-201ENST00000617283 64 ntBASIC2.13□□□□□ -2.07
COL18A1P39060 AC006249.1-201ENST00000621223 471 ntBASIC2.13□□□□□ -2.07
COL18A1P39060 AC095031.1-201ENST00000623685 672 ntBASIC2.13□□□□□ -2.07
COL18A1P39060 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.13□□□□□ -2.07
COL18A1P39060 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.12□□□□□ -2.07
COL18A1P39060 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.12□□□□□ -2.07
COL18A1P39060 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL18A1P39060 RNU6-251P-201ENST00000363235 104 ntBASIC2.12□□□□□ -2.07
COL18A1P39060 AP002784.2-201ENST00000397300 549 ntBASIC2.12□□□□□ -2.07
COL18A1P39060 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.12□□□□□ -2.07
COL18A1P39060 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.12□□□□□ -2.07
COL18A1P39060 AL096803.2-201ENST00000450032 677 ntBASIC2.12□□□□□ -2.07
COL18A1P39060 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.12□□□□□ -2.07
COL18A1P39060 AC108734.3-201ENST00000481241 1165 ntBASIC2.12□□□□□ -2.07
COL18A1P39060 RAC1P5-201ENST00000512182 576 ntBASIC2.12□□□□□ -2.07
COL18A1P39060 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.12□□□□□ -2.07
COL18A1P39060 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.12□□□□□ -2.07
COL18A1P39060 AC022690.1-201ENST00000526681 550 ntBASIC2.12□□□□□ -2.07
COL18A1P39060 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.12□□□□□ -2.07
COL18A1P39060 AL161670.1-201ENST00000554348 137 ntBASIC2.12□□□□□ -2.07
COL18A1P39060 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL18A1P39060 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.12□□□□□ -2.07
COL18A1P39060 ZNF663P-202ENST00000641770 1131 ntBASIC2.12□□□□□ -2.07
COL18A1P39060 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL18A1P39060 AC090740.1-201ENST00000623193 2262 ntBASIC2.12□□□□□ -2.07
COL18A1P39060 RNU6-989P-201ENST00000362756 107 ntBASIC2.11□□□□□ -2.07
COL18A1P39060 RNU6-115P-201ENST00000364310 107 ntBASIC2.11□□□□□ -2.07
COL18A1P39060 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.11□□□□□ -2.07
COL18A1P39060 RNU6-712P-201ENST00000410558 100 ntBASIC2.11□□□□□ -2.07
COL18A1P39060 HMGN2P35-201ENST00000412164 270 ntBASIC2.11□□□□□ -2.07
COL18A1P39060 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.11□□□□□ -2.07
COL18A1P39060 NAP1L1P3-201ENST00000462291 880 ntBASIC2.11□□□□□ -2.07
COL18A1P39060 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.11□□□□□ -2.07
COL18A1P39060 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.11□□□□□ -2.07
COL18A1P39060 AC118282.2-201ENST00000508739 374 ntBASIC2.11□□□□□ -2.07
COL18A1P39060 ERHP1-201ENST00000523006 310 ntBASIC2.11□□□□□ -2.07
COL18A1P39060 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.11□□□□□ -2.07
COL18A1P39060 SNRPGP16-201ENST00000533275 226 ntBASIC2.11□□□□□ -2.07
COL18A1P39060 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.11□□□□□ -2.07
COL18A1P39060 NIFKP8-201ENST00000560500 874 ntBASIC2.11□□□□□ -2.07
COL18A1P39060 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.11□□□□□ -2.07
COL18A1P39060 SNORD39.3-201ENST00000584451 71 ntBASIC2.11□□□□□ -2.07
COL18A1P39060 AC055876.5-201ENST00000605667 259 ntBASIC2.11□□□□□ -2.07
COL18A1P39060 AL138880.2-201ENST00000616214 239 ntBASIC2.11□□□□□ -2.07
COL18A1P39060 AL590396.4-201ENST00000636779 956 ntBASIC2.11□□□□□ -2.07
COL18A1P39060 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL18A1P39060 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL18A1P39060 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
COL18A1P39060 RNU1-42P-201ENST00000364033 160 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 RNU6-481P-201ENST00000384194 107 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 AL035410.1-201ENST00000427409 427 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.1□□□□□ -2.07
COL18A1P39060 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL18A1P39060 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.1□□□□□ -2.07
COL18A1P39060 AC048346.1-201ENST00000510247 144 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 RNA5SP102-201ENST00000516865 106 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 AP000790.1-201ENST00000528891 737 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.1□□□□□ -2.07
COL18A1P39060 AC015720.1-201ENST00000565251 277 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.1□□□□□ -2.07
COL18A1P39060 AP002906.1-201ENST00000603405 233 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 DUXAP3-201ENST00000603616 594 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 AC008962.1-201ENST00000605729 304 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 MIR6076-201ENST00000617521 113 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 AL445493.3-201ENST00000619568 477 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 AL360181.4-201ENST00000621752 134 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.1□□□□□ -2.07
COL18A1P39060 SNORA14A-201ENST00000364773 135 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 RNU6-619P-201ENST00000365146 108 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 RNU6-1074P-201ENST00000383995 104 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 SNORA51.6-201ENST00000384151 125 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 AL606495.1-201ENST00000422100 813 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 FAM204CP-201ENST00000424489 642 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 TPT1P14-201ENST00000448018 505 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.1□□□□□ -2.07
COL18A1P39060 NDUFA5P7-201ENST00000452914 242 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.1□□□□□ -2.07
COL18A1P39060 snoU109.4-201ENST00000458953 143 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 AC084024.2-201ENST00000503480 791 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 RNU6-56P-201ENST00000516986 93 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.1□□□□□ -2.07
COL18A1P39060 AP001804.3-201ENST00000525146 880 ntBASIC2.1□□□□□ -2.07
COL18A1P39060 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms