Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.23□□□□□ -2.05
USF1P22415 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
USF1P22415 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
USF1P22415 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USF1P22415 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.23□□□□□ -2.05
USF1P22415 RNU6-217P-201ENST00000384164 104 ntBASIC2.23□□□□□ -2.05
USF1P22415 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.23□□□□□ -2.05
USF1P22415 FGF7P5-201ENST00000441829 291 ntBASIC2.23□□□□□ -2.05
USF1P22415 RPS15AP27-201ENST00000449183 343 ntBASIC2.23□□□□□ -2.05
USF1P22415 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.23□□□□□ -2.05
USF1P22415 RPS3P1-201ENST00000456781 192 ntBASIC2.23□□□□□ -2.05
USF1P22415 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.23□□□□□ -2.05
USF1P22415 AC104563.1-201ENST00000476147 376 ntBASIC2.23□□□□□ -2.05
USF1P22415 AC021382.1-201ENST00000483523 359 ntBASIC2.23□□□□□ -2.05
USF1P22415 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.23□□□□□ -2.05
USF1P22415 AC138853.1-201ENST00000503549 823 ntBASIC2.23□□□□□ -2.05
USF1P22415 AC113155.1-201ENST00000511141 769 ntBASIC2.23□□□□□ -2.05
USF1P22415 SNORA19.3-201ENST00000516165 130 ntBASIC2.23□□□□□ -2.05
USF1P22415 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.23□□□□□ -2.05
USF1P22415 SUB1P1-201ENST00000524415 382 ntBASIC2.23□□□□□ -2.05
USF1P22415 AP003497.1-201ENST00000528472 562 ntBASIC2.23□□□□□ -2.05
USF1P22415 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
USF1P22415 CYCSP2-201ENST00000558168 301 ntBASIC2.23□□□□□ -2.05
USF1P22415 AC103810.1-201ENST00000579873 453 ntBASIC2.23□□□□□ -2.05
USF1P22415 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.23□□□□□ -2.05
USF1P22415 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.23□□□□□ -2.05
USF1P22415 AL049779.4-201ENST00000604500 156 ntBASIC2.23□□□□□ -2.05
USF1P22415 PART1_2.1-201ENST00000612397 250 ntBASIC2.23□□□□□ -2.05
USF1P22415 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.23□□□□□ -2.05
USF1P22415 AC010297.1-201ENST00000623948 149 ntBASIC2.23□□□□□ -2.05
USF1P22415 AC106858.1-201ENST00000637497 429 ntBASIC2.23□□□□□ -2.05
USF1P22415 AC013437.2-201ENST00000639587 677 ntBASIC2.23□□□□□ -2.05
USF1P22415 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USF1P22415 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.23□□□□□ -2.05
USF1P22415 DDX10P1-201ENST00000448545 1933 ntBASIC2.23□□□□□ -2.05
USF1P22415 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USF1P22415 SNORA23-201ENST00000365128 182 ntBASIC2.22□□□□□ -2.05
USF1P22415 RNU1-138P-201ENST00000384093 164 ntBASIC2.22□□□□□ -2.05
USF1P22415 SNORA70B-201ENST00000384210 135 ntBASIC2.22□□□□□ -2.05
USF1P22415 SNORD116-12-201ENST00000384468 92 ntBASIC2.22□□□□□ -2.05
USF1P22415 MIR592-201ENST00000384959 97 ntBASIC2.22□□□□□ -2.05
USF1P22415 ANAPC10P1-201ENST00000395991 556 ntBASIC2.22□□□□□ -2.05
USF1P22415 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.22□□□□□ -2.05
USF1P22415 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.22□□□□□ -2.05
USF1P22415 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.22□□□□□ -2.05
USF1P22415 MTND1P21-201ENST00000412991 285 ntBASIC2.22□□□□□ -2.05
USF1P22415 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.22□□□□□ -2.05
USF1P22415 USP9YP11-201ENST00000427537 717 ntBASIC2.22□□□□□ -2.05
USF1P22415 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.22□□□□□ -2.05
USF1P22415 AC009296.1-201ENST00000443146 155 ntBASIC2.22□□□□□ -2.05
USF1P22415 MTND1P31-201ENST00000449206 961 ntBASIC2.22□□□□□ -2.05
USF1P22415 AC009961.3-201ENST00000449832 765 ntBASIC2.22□□□□□ -2.05
USF1P22415 AL513124.1-201ENST00000450410 614 ntBASIC2.22□□□□□ -2.05
USF1P22415 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.22□□□□□ -2.05
USF1P22415 AC027673.1-201ENST00000456245 405 ntBASIC2.22□□□□□ -2.05
USF1P22415 ATG12P2-201ENST00000456830 416 ntBASIC2.22□□□□□ -2.05
USF1P22415 AC073901.1-201ENST00000462471 408 ntBASIC2.22□□□□□ -2.05
USF1P22415 AC128713.1-201ENST00000471495 306 ntBASIC2.22□□□□□ -2.05
USF1P22415 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.22□□□□□ -2.05
USF1P22415 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.22□□□□□ -2.05
USF1P22415 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.22□□□□□ -2.05
USF1P22415 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.22□□□□□ -2.05
USF1P22415 CDC42P4-201ENST00000510507 563 ntBASIC2.22□□□□□ -2.05
USF1P22415 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.22□□□□□ -2.05
USF1P22415 RNU6-150P-201ENST00000516237 95 ntBASIC2.22□□□□□ -2.05
USF1P22415 RN7SKP40-201ENST00000517211 242 ntBASIC2.22□□□□□ -2.05
USF1P22415 HMGN1P28-201ENST00000521340 364 ntBASIC2.22□□□□□ -2.05
USF1P22415 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.22□□□□□ -2.05
USF1P22415 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.22□□□□□ -2.05
USF1P22415 OR4K7P-201ENST00000580232 945 ntBASIC2.22□□□□□ -2.05
USF1P22415 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.22□□□□□ -2.05
USF1P22415 DNAJC19P3-201ENST00000594491 331 ntBASIC2.22□□□□□ -2.05
USF1P22415 BNIP3P31-201ENST00000604515 566 ntBASIC2.22□□□□□ -2.05
USF1P22415 AC087241.4-201ENST00000612441 480 ntBASIC2.22□□□□□ -2.05
USF1P22415 AC079395.3-201ENST00000615161 484 ntBASIC2.22□□□□□ -2.05
USF1P22415 AL121895.2-201ENST00000619558 447 ntBASIC2.22□□□□□ -2.05
USF1P22415 AC025034.2-201ENST00000623264 286 ntBASIC2.22□□□□□ -2.05
USF1P22415 CR381653.2-201ENST00000624041 768 ntBASIC2.22□□□□□ -2.05
USF1P22415 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.22□□□□□ -2.05
USF1P22415 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.22□□□□□ -2.05
USF1P22415 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.22□□□□□ -2.05
USF1P22415 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USF1P22415 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
USF1P22415 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.21□□□□□ -2.05
USF1P22415 AL138713.1-201ENST00000624026 2130 ntBASIC2.21□□□□□ -2.06
USF1P22415 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.21□□□□□ -2.06
USF1P22415 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USF1P22415 SET-203ENST00000372688 801 ntTSL 2 BASIC2.21□□□□□ -2.06
USF1P22415 RNU6-413P-201ENST00000384115 107 ntBASIC2.21□□□□□ -2.06
USF1P22415 Y_RNA.472-201ENST00000384322 102 ntBASIC2.21□□□□□ -2.06
USF1P22415 RNU6-754P-201ENST00000391166 107 ntBASIC2.21□□□□□ -2.06
USF1P22415 AL109755.1-201ENST00000401791 649 ntBASIC2.21□□□□□ -2.06
USF1P22415 AL356057.3-201ENST00000402607 340 ntBASIC2.21□□□□□ -2.06
USF1P22415 AL356421.1-201ENST00000403255 413 ntBASIC2.21□□□□□ -2.06
USF1P22415 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.21□□□□□ -2.06
USF1P22415 AC098614.2-201ENST00000426040 255 ntBASIC2.21□□□□□ -2.06
USF1P22415 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.21□□□□□ -2.06
USF1P22415 SUMO1P4-201ENST00000429430 302 ntBASIC2.21□□□□□ -2.06
USF1P22415 AC092427.1-202ENST00000430569 476 ntBASIC2.21□□□□□ -2.06
USF1P22415 AL358794.1-201ENST00000445689 381 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms