| MUC1 | P15941 | AC007490.1-201 | ENST00000624321 | 703 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MUC1 | P15941 | AC017037.3-201 | ENST00000625016 | 472 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MUC1 | P15941 | AL139220.2-223 | ENST00000625982 | 921 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| MUC1 | P15941 | AC103706.2-201 | ENST00000638080 | 240 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MUC1 | P15941 | AC131280.1-202 | ENST00000624067 | 4211 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MUC1 | P15941 | DDX43P2-201 | ENST00000604753 | 1354 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MUC1 | P15941 | AL359693.1-201 | ENST00000614959 | 2407 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC011477.1-204 | ENST00000623416 | 1325 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL391994.1-201 | ENST00000254724 | 282 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | CXCL10-201 | ENST00000306602 | 1176 nt | APPRIS P1 TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | TTTY13-201 | ENST00000330337 | 659 nt | TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | SNORA5B-201 | ENST00000363786 | 132 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | U3.37-201 | ENST00000408528 | 213 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | CCDC126-203 | ENST00000410069 | 890 nt | APPRIS P1 TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | RNA5SP184-201 | ENST00000411071 | 108 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | RPLP0P7-201 | ENST00000416050 | 667 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | LURAP1L-AS1-201 | ENST00000417638 | 799 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | OFD1P11Y-201 | ENST00000418213 | 1177 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | LINC01402-201 | ENST00000422226 | 279 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | BX119904.4-201 | ENST00000424402 | 301 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL080248.1-201 | ENST00000428954 | 388 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | SGO1P2-201 | ENST00000429458 | 1589 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL138775.1-201 | ENST00000429539 | 575 nt | TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL139118.1-201 | ENST00000432707 | 446 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | INTS6-AS1-201 | ENST00000434512 | 466 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | LINC00353-201 | ENST00000435401 | 685 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | MTCYBP34-201 | ENST00000439552 | 670 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | RABEPKP1-201 | ENST00000440529 | 1026 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL606662.1-201 | ENST00000445763 | 553 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC234781.5-202 | ENST00000453508 | 426 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | SNRPG-206 | ENST00000454893 | 527 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | LINC00709-201 | ENST00000458168 | 494 nt | TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | snoU13.4-201 | ENST00000458916 | 104 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC126182.1-201 | ENST00000478134 | 357 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | UBE2Q2P9-201 | ENST00000490086 | 202 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC084117.1-201 | ENST00000496975 | 270 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | LINC02198-201 | ENST00000504280 | 810 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | LINC01846-201 | ENST00000505908 | 651 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | LINC02364-201 | ENST00000514802 | 687 nt | TSL 2 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | RNA5SP356-201 | ENST00000515972 | 94 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | SUB1P1-201 | ENST00000524415 | 382 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AP003730.2-201 | ENST00000526385 | 546 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | UBTFL10-201 | ENST00000528532 | 562 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC010196.1-201 | ENST00000550014 | 450 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | ZNF321P-202 | ENST00000550843 | 495 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC011773.2-201 | ENST00000551479 | 285 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC009094.1-201 | ENST00000564443 | 426 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | FOPNL-205 | ENST00000573429 | 646 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | LIVAR-201 | ENST00000578633 | 384 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC127024.3-201 | ENST00000582841 | 460 nt | TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC087749.2-201 | ENST00000583910 | 352 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL157938.2-201 | ENST00000587264 | 894 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL353778.1-201 | ENST00000603149 | 408 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC004987.4-201 | ENST00000603383 | 338 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | DUXAP11-201 | ENST00000603858 | 526 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL033523.1-201 | ENST00000605153 | 153 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | MIR6895-201 | ENST00000613497 | 78 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AP000770.2-201 | ENST00000623694 | 100 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC092608.2-201 | ENST00000624427 | 218 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | MARCH6-215 | ENST00000640713 | 231 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | ZBBX-201 | ENST00000307529 | 3071 nt | APPRIS ALT2 TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | ZBBX-204 | ENST00000392767 | 3071 nt | APPRIS ALT2 TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | CEP57-213 | ENST00000541150 | 2911 nt | APPRIS ALT2 TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| MUC1 | P15941 | PAPPA-AS1-201 | ENST00000445861 | 2450 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | COMMD8-201 | ENST00000381571 | 1469 nt | APPRIS P1 TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC080100.1-201 | ENST00000624239 | 5356 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | FRG1BP-201 | ENST00000278882 | 761 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | Y_RNA.234-201 | ENST00000364409 | 97 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | TRAV34-201 | ENST00000390461 | 349 nt | APPRIS P1 BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | YPEL5P1-201 | ENST00000419731 | 367 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL137014.1-201 | ENST00000420490 | 1226 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC005005.2-201 | ENST00000420779 | 380 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC011233.1-201 | ENST00000422812 | 283 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL022400.1-201 | ENST00000423946 | 935 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | MTCO1P39-201 | ENST00000426148 | 480 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC004691.1-201 | ENST00000440376 | 547 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC019330.1-202 | ENST00000440609 | 504 nt | TSL 4 BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AP000936.2-201 | ENST00000447151 | 681 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | MTCO1P27-201 | ENST00000448269 | 226 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | OR6C5P-201 | ENST00000452388 | 923 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL355314.1-201 | ENST00000453639 | 316 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | Z98749.1-201 | ENST00000454123 | 541 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC234775.1-201 | ENST00000454247 | 670 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC096666.1-201 | ENST00000454965 | 348 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AL157373.1-201 | ENST00000456036 | 276 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | C1orf185-202 | ENST00000467127 | 747 nt | APPRIS ALT2 TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC004924.1-201 | ENST00000480160 | 781 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC092059.1-201 | ENST00000485347 | 429 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | FAM172BP-201 | ENST00000487497 | 1089 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | SRIP1-201 | ENST00000489235 | 288 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | APOA2-210 | ENST00000491350 | 263 nt | TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC093752.1-212 | ENST00000500559 | 453 nt | TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC104685.1-201 | ENST00000502445 | 371 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | LTV1P1-201 | ENST00000510683 | 1237 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC091906.1-201 | ENST00000511310 | 391 nt | TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC114316.1-201 | ENST00000511323 | 278 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AC095057.2-201 | ENST00000515422 | 553 nt | TSL 4 BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | RNU6-714P-201 | ENST00000516963 | 103 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | AP003461.1-201 | ENST00000528866 | 78 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MUC1 | P15941 | SNRPGP16-201 | ENST00000533275 | 226 nt | BASIC | 2.2 | □□□□□ -2.06 | | |