Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNU4-52P-201ENST00000384209 138 ntBASIC1□□□□□ -2.25
VCANP13611 SETP10-201ENST00000424368 814 ntBASIC1□□□□□ -2.25
VCANP13611 AL161651.1-201ENST00000440882 223 ntBASIC1□□□□□ -2.25
VCANP13611 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1□□□□□ -2.25
VCANP13611 RNA5SP82-201ENST00000516707 92 ntBASIC1□□□□□ -2.25
VCANP13611 AC121758.2-201ENST00000553271 193 ntBASIC1□□□□□ -2.25
VCANP13611 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1□□□□□ -2.25
VCANP13611 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1□□□□□ -2.25
VCANP13611 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
VCANP13611 RNU6-418P-201ENST00000384035 107 ntBASIC1□□□□□ -2.25
VCANP13611 SCARNA1-201ENST00000517138 166 ntBASIC1□□□□□ -2.25
VCANP13611 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1□□□□□ -2.25
VCANP13611 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1□□□□□ -2.25
VCANP13611 MIR4802-201ENST00000581881 80 ntBASIC1□□□□□ -2.25
VCANP13611 AC012531.5-201ENST00000611375 151 ntBASIC1□□□□□ -2.25
VCANP13611 MIR6715B-201ENST00000637172 77 ntBASIC1□□□□□ -2.25
VCANP13611 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
VCANP13611 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
VCANP13611 RNA5SP310-201ENST00000459084 116 ntBASIC0.99□□□□□ -2.25
VCANP13611 AC023424.2-201ENST00000493479 777 ntBASIC0.99□□□□□ -2.25
VCANP13611 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.99□□□□□ -2.25
VCANP13611 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
VCANP13611 MIR7974-201ENST00000615835 79 ntBASIC0.99□□□□□ -2.25
VCANP13611 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC0.99□□□□□ -2.25
VCANP13611 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC0.99□□□□□ -2.25
VCANP13611 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.99□□□□□ -2.25
VCANP13611 AP005597.4-201ENST00000526762 229 ntBASIC0.99□□□□□ -2.25
VCANP13611 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
VCANP13611 MIR329-2-201ENST00000385029 84 ntBASIC0.99□□□□□ -2.25
VCANP13611 AC060773.1-201ENST00000421698 310 ntBASIC0.99□□□□□ -2.25
VCANP13611 RWDD4P2-201ENST00000426392 563 ntBASIC0.99□□□□□ -2.25
VCANP13611 RPS15AP7-201ENST00000439294 405 ntBASIC0.99□□□□□ -2.25
VCANP13611 RPS29P23-201ENST00000458635 123 ntBASIC0.99□□□□□ -2.25
VCANP13611 RWDD4P1-201ENST00000488019 565 ntBASIC0.99□□□□□ -2.25
VCANP13611 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
VCANP13611 LINC01347-201ENST00000417964 355 ntBASIC0.98□□□□□ -2.25
VCANP13611 USP9YP7-201ENST00000436723 430 ntBASIC0.98□□□□□ -2.25
VCANP13611 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.98□□□□□ -2.25
VCANP13611 USP9YP32-201ENST00000452432 430 ntBASIC0.98□□□□□ -2.25
VCANP13611 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.98□□□□□ -2.25
VCANP13611 GTF2IP12-201ENST00000456547 356 ntBASIC0.98□□□□□ -2.25
VCANP13611 ANP32BP3-201ENST00000559213 706 ntBASIC0.98□□□□□ -2.25
VCANP13611 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.98□□□□□ -2.25
VCANP13611 AC018690.1-201ENST00000608144 626 ntBASIC0.98□□□□□ -2.25
VCANP13611 CNOT6LP1-201ENST00000559681 1462 ntBASIC0.98□□□□□ -2.25
VCANP13611 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
VCANP13611 RNA5SP25-201ENST00000410815 110 ntBASIC0.98□□□□□ -2.25
VCANP13611 GDI2P2-201ENST00000445131 608 ntBASIC0.98□□□□□ -2.25
VCANP13611 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
VCANP13611 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.98□□□□□ -2.25
VCANP13611 AC067863.3-201ENST00000624172 122 ntBASIC0.98□□□□□ -2.25
VCANP13611 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
VCANP13611 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC0.98□□□□□ -2.25
VCANP13611 AC109583.1-201ENST00000432156 268 ntBASIC0.97□□□□□ -2.25
VCANP13611 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC0.97□□□□□ -2.25
VCANP13611 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.97□□□□□ -2.25
VCANP13611 AC007115.1-201ENST00000546853 234 ntBASIC0.97□□□□□ -2.25
VCANP13611 AL391261.3-201ENST00000557194 520 ntBASIC0.97□□□□□ -2.25
VCANP13611 AL161912.3-201ENST00000605404 628 ntBASIC0.97□□□□□ -2.25
VCANP13611 AC018754.1-201ENST00000607486 925 ntBASIC0.97□□□□□ -2.25
VCANP13611 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
VCANP13611 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
VCANP13611 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC0.97□□□□□ -2.25
VCANP13611 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.97□□□□□ -2.25
VCANP13611 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.97□□□□□ -2.25
VCANP13611 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.97□□□□□ -2.25
VCANP13611 RPL23AP88-201ENST00000605759 454 ntBASIC0.97□□□□□ -2.25
VCANP13611 SNORA62.2-201ENST00000364672 152 ntBASIC0.97□□□□□ -2.25
VCANP13611 AC019155.1-201ENST00000382242 574 ntBASIC0.97□□□□□ -2.25
VCANP13611 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.97□□□□□ -2.25
VCANP13611 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.97□□□□□ -2.25
VCANP13611 AC067942.3-201ENST00000512025 362 ntBASIC0.97□□□□□ -2.25
VCANP13611 SNORA31.23-201ENST00000517219 133 ntBASIC0.97□□□□□ -2.25
VCANP13611 MIR4446-201ENST00000578505 67 ntBASIC0.97□□□□□ -2.25
VCANP13611 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC0.96□□□□□ -2.26
VCANP13611 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC0.96□□□□□ -2.26
VCANP13611 AC006483.1-201ENST00000487308 313 ntBASIC0.96□□□□□ -2.26
VCANP13611 SEM1P1-201ENST00000506694 209 ntBASIC0.96□□□□□ -2.26
VCANP13611 AC008676.3-201ENST00000521237 435 ntBASIC0.96□□□□□ -2.26
VCANP13611 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
VCANP13611 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
VCANP13611 SNHG22-203ENST00000617833 660 ntBASIC0.96□□□□□ -2.26
VCANP13611 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.96□□□□□ -2.26
VCANP13611 XIAPP3-201ENST00000312918 795 ntBASIC0.96□□□□□ -2.26
VCANP13611 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.96□□□□□ -2.26
VCANP13611 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC0.96□□□□□ -2.26
VCANP13611 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.96□□□□□ -2.26
VCANP13611 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.96□□□□□ -2.26
VCANP13611 AP001960.1-201ENST00000506494 658 ntBASIC0.96□□□□□ -2.26
VCANP13611 GOLGA5P1-201ENST00000507317 980 ntBASIC0.96□□□□□ -2.26
VCANP13611 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC0.96□□□□□ -2.26
VCANP13611 AC012557.2-201ENST00000605919 418 ntBASIC0.96□□□□□ -2.26
VCANP13611 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.96□□□□□ -2.26
VCANP13611 NACAP2-201ENST00000318548 624 ntBASIC0.96□□□□□ -2.26
VCANP13611 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.96□□□□□ -2.26
VCANP13611 AC109780.2-201ENST00000413467 845 ntBASIC0.96□□□□□ -2.26
VCANP13611 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.96□□□□□ -2.26
VCANP13611 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.96□□□□□ -2.26
VCANP13611 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.96□□□□□ -2.26
VCANP13611 AC090096.1-201ENST00000489168 390 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms