Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
BMP3P12645 SUB1P3-201ENST00000564581 315 ntBASIC5.1□□□□□ -1.59
BMP3P12645 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.1□□□□□ -1.59
BMP3P12645 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.1□□□□□ -1.59
BMP3P12645 MIR3936-201ENST00000584304 110 ntBASIC5.1□□□□□ -1.59
BMP3P12645 AC010201.1-201ENST00000605051 540 ntBASIC5.1□□□□□ -1.59
BMP3P12645 AL161423.1-201ENST00000613700 262 ntBASIC5.1□□□□□ -1.59
BMP3P12645 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
BMP3P12645 AL023881.1-201ENST00000621088 301 ntBASIC5.1□□□□□ -1.59
BMP3P12645 RNU6-156P-201ENST00000621869 107 ntBASIC5.1□□□□□ -1.59
BMP3P12645 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.1□□□□□ -1.59
BMP3P12645 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BMP3P12645 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
BMP3P12645 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.09□□□□□ -1.59
BMP3P12645 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.09□□□□□ -1.59
BMP3P12645 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
BMP3P12645 PROS2P-201ENST00000474651 1951 ntBASIC5.09□□□□□ -1.59
BMP3P12645 AC009313.2-201ENST00000417893 1941 ntBASIC5.09□□□□□ -1.59
BMP3P12645 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.09□□□□□ -1.59
BMP3P12645 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
BMP3P12645 OR56A5-201ENST00000340110 738 ntBASIC5.09□□□□□ -1.59
BMP3P12645 Y_RNA.26-201ENST00000362539 101 ntBASIC5.09□□□□□ -1.59
BMP3P12645 Y_RNA.180-201ENST00000363867 113 ntBASIC5.09□□□□□ -1.59
BMP3P12645 RN7SKP227-201ENST00000364445 330 ntBASIC5.09□□□□□ -1.59
BMP3P12645 SNORD82-201ENST00000365530 70 ntBASIC5.09□□□□□ -1.59
BMP3P12645 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
BMP3P12645 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
BMP3P12645 AL109755.1-201ENST00000401791 649 ntBASIC5.09□□□□□ -1.59
BMP3P12645 AC096664.2-201ENST00000411843 406 ntBASIC5.09□□□□□ -1.59
BMP3P12645 AL358176.3-201ENST00000420757 454 ntBASIC5.09□□□□□ -1.59
BMP3P12645 RBMY1KP-201ENST00000423480 476 ntBASIC5.09□□□□□ -1.59
BMP3P12645 RPL23AP38-201ENST00000423801 469 ntBASIC5.09□□□□□ -1.59
BMP3P12645 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.09□□□□□ -1.59
BMP3P12645 RPL23AP25-201ENST00000430973 463 ntBASIC5.09□□□□□ -1.59
BMP3P12645 CHEK2P4-201ENST00000450340 246 ntBASIC5.09□□□□□ -1.59
BMP3P12645 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
BMP3P12645 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
BMP3P12645 RPL36AP13-201ENST00000457490 317 ntBASIC5.09□□□□□ -1.59
BMP3P12645 SNORD97-201ENST00000459187 142 ntBASIC5.09□□□□□ -1.59
BMP3P12645 RN7SL41P-201ENST00000476144 297 ntBASIC5.09□□□□□ -1.59
BMP3P12645 RN7SKP21-201ENST00000516503 220 ntBASIC5.09□□□□□ -1.59
BMP3P12645 RNU6-111P-201ENST00000517179 105 ntBASIC5.09□□□□□ -1.59
BMP3P12645 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.09□□□□□ -1.59
BMP3P12645 MRPL49P2-201ENST00000521066 465 ntBASIC5.09□□□□□ -1.59
BMP3P12645 AP003730.1-201ENST00000524605 285 ntBASIC5.09□□□□□ -1.59
BMP3P12645 RANP3-201ENST00000530970 276 ntBASIC5.09□□□□□ -1.59
BMP3P12645 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
BMP3P12645 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
BMP3P12645 HSPE1P20-201ENST00000538133 289 ntBASIC5.09□□□□□ -1.59
BMP3P12645 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.09□□□□□ -1.59
BMP3P12645 AC074050.1-201ENST00000563247 211 ntBASIC5.09□□□□□ -1.59
BMP3P12645 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
BMP3P12645 AC068724.3-201ENST00000625906 87 ntBASIC5.09□□□□□ -1.59
BMP3P12645 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.09□□□□□ -1.59
BMP3P12645 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.09□□□□□ -1.59
BMP3P12645 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
BMP3P12645 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.09□□□□□ -1.6
BMP3P12645 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
BMP3P12645 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.09□□□□□ -1.6
BMP3P12645 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
BMP3P12645 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
BMP3P12645 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BMP3P12645 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
BMP3P12645 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.08□□□□□ -1.6
BMP3P12645 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BMP3P12645 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.08□□□□□ -1.6
BMP3P12645 AC015813.6-201ENST00000624409 5808 ntBASIC5.08□□□□□ -1.6
BMP3P12645 RNU6-842P-201ENST00000384269 107 ntBASIC5.08□□□□□ -1.6
BMP3P12645 SNORA70C-201ENST00000384538 135 ntBASIC5.08□□□□□ -1.6
BMP3P12645 Y_RNA.518-201ENST00000384552 113 ntBASIC5.08□□□□□ -1.6
BMP3P12645 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.08□□□□□ -1.6
BMP3P12645 AL137014.1-201ENST00000420490 1226 ntBASIC5.08□□□□□ -1.6
BMP3P12645 AC005008.1-201ENST00000456151 612 ntBASIC5.08□□□□□ -1.6
BMP3P12645 RPL9P32-201ENST00000464118 620 ntBASIC5.08□□□□□ -1.6
BMP3P12645 AC087884.1-201ENST00000469738 328 ntBASIC5.08□□□□□ -1.6
BMP3P12645 AC108751.2-201ENST00000469993 231 ntBASIC5.08□□□□□ -1.6
BMP3P12645 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.08□□□□□ -1.6
BMP3P12645 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.08□□□□□ -1.6
BMP3P12645 RNU6-323P-201ENST00000521915 107 ntBASIC5.08□□□□□ -1.6
BMP3P12645 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.08□□□□□ -1.6
BMP3P12645 AC040926.1-201ENST00000530195 238 ntBASIC5.08□□□□□ -1.6
BMP3P12645 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BMP3P12645 AC026371.1-201ENST00000551867 419 ntBASIC5.08□□□□□ -1.6
BMP3P12645 RN7SL176P-201ENST00000580352 264 ntBASIC5.08□□□□□ -1.6
BMP3P12645 MIR3910-1-201ENST00000580936 111 ntBASIC5.08□□□□□ -1.6
BMP3P12645 MIR5188-201ENST00000583467 113 ntBASIC5.08□□□□□ -1.6
BMP3P12645 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.08□□□□□ -1.6
BMP3P12645 FTX_2.1-201ENST00000618816 94 ntBASIC5.08□□□□□ -1.6
BMP3P12645 AC091903.1-201ENST00000624322 454 ntBASIC5.08□□□□□ -1.6
BMP3P12645 MIR4272-201ENST00000635924 64 ntBASIC5.08□□□□□ -1.6
BMP3P12645 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.08□□□□□ -1.6
BMP3P12645 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
BMP3P12645 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BMP3P12645 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
BMP3P12645 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.08□□□□□ -1.6
BMP3P12645 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
BMP3P12645 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BMP3P12645 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BMP3P12645 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
BMP3P12645 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms