Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC012005.1-201ENST00000624575 75 ntBASIC2.36□□□□□ -2.03
TPM1P09493 MIR4275-201ENST00000636486 87 ntBASIC2.36□□□□□ -2.03
TPM1P09493 AC004944.1-201ENST00000517807 3059 ntBASIC2.36□□□□□ -2.03
TPM1P09493 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
TPM1P09493 AC004520.1-201ENST00000608362 1413 ntBASIC2.35□□□□□ -2.03
TPM1P09493 U6.112-201ENST00000384129 70 ntBASIC2.35□□□□□ -2.03
TPM1P09493 RNU6-140P-201ENST00000384566 108 ntBASIC2.35□□□□□ -2.03
TPM1P09493 AL109755.1-201ENST00000401791 649 ntBASIC2.35□□□□□ -2.03
TPM1P09493 RNA5SP338-201ENST00000410495 85 ntBASIC2.35□□□□□ -2.03
TPM1P09493 LUZP4P1-201ENST00000415420 344 ntBASIC2.35□□□□□ -2.03
TPM1P09493 CYCSP48-201ENST00000417124 323 ntBASIC2.35□□□□□ -2.03
TPM1P09493 DEFB130D-201ENST00000426866 237 ntBASIC2.35□□□□□ -2.03
TPM1P09493 MYL8P-204ENST00000431574 518 ntBASIC2.35□□□□□ -2.03
TPM1P09493 MICF-203ENST00000432679 129 ntBASIC2.35□□□□□ -2.03
TPM1P09493 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.35□□□□□ -2.03
TPM1P09493 TPRKBP1-201ENST00000456243 481 ntBASIC2.35□□□□□ -2.03
TPM1P09493 MTND2P30-201ENST00000456663 382 ntBASIC2.35□□□□□ -2.03
TPM1P09493 RPL26P9-201ENST00000457466 433 ntBASIC2.35□□□□□ -2.03
TPM1P09493 KLF3P2-201ENST00000465138 268 ntBASIC2.35□□□□□ -2.03
TPM1P09493 RNU6-528P-201ENST00000516926 100 ntBASIC2.35□□□□□ -2.03
TPM1P09493 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.35□□□□□ -2.03
TPM1P09493 AC125611.1-201ENST00000549563 229 ntBASIC2.35□□□□□ -2.03
TPM1P09493 OR11H5P-201ENST00000554039 926 ntBASIC2.35□□□□□ -2.03
TPM1P09493 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.35□□□□□ -2.03
TPM1P09493 LINC00557-201ENST00000563184 1279 ntBASIC2.35□□□□□ -2.03
TPM1P09493 AL138976.2-201ENST00000563989 694 ntBASIC2.35□□□□□ -2.03
TPM1P09493 LARP7P3-201ENST00000579888 337 ntBASIC2.35□□□□□ -2.03
TPM1P09493 MIR5002-201ENST00000584713 97 ntBASIC2.35□□□□□ -2.03
TPM1P09493 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.35□□□□□ -2.03
TPM1P09493 AC009314.1-201ENST00000603871 304 ntBASIC2.35□□□□□ -2.03
TPM1P09493 AC120053.1-201ENST00000607706 736 ntBASIC2.35□□□□□ -2.03
TPM1P09493 AL159972.1-201ENST00000625150 448 ntBASIC2.35□□□□□ -2.03
TPM1P09493 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.35□□□□□ -2.03
TPM1P09493 MTCO1P9-201ENST00000505577 1534 ntBASIC2.35□□□□□ -2.03
TPM1P09493 CENPCP1-201ENST00000533085 2578 ntBASIC2.35□□□□□ -2.03
TPM1P09493 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TPM1P09493 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
TPM1P09493 RNU6-1300P-201ENST00000391046 108 ntBASIC2.34□□□□□ -2.03
TPM1P09493 MIR888-201ENST00000401186 77 ntBASIC2.34□□□□□ -2.03
TPM1P09493 AC096649.2-201ENST00000416186 393 ntBASIC2.34□□□□□ -2.03
TPM1P09493 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.34□□□□□ -2.03
TPM1P09493 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.34□□□□□ -2.03
TPM1P09493 AL109913.1-201ENST00000421173 514 ntBASIC2.34□□□□□ -2.03
TPM1P09493 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.34□□□□□ -2.03
TPM1P09493 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.34□□□□□ -2.03
TPM1P09493 UBE2FP3-201ENST00000436366 524 ntBASIC2.34□□□□□ -2.03
TPM1P09493 MTCYBP11-201ENST00000447254 1109 ntBASIC2.34□□□□□ -2.03
TPM1P09493 RPL39P6-201ENST00000448289 150 ntBASIC2.34□□□□□ -2.03
TPM1P09493 MTCO3P11-201ENST00000455103 774 ntBASIC2.34□□□□□ -2.03
TPM1P09493 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.34□□□□□ -2.03
TPM1P09493 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.34□□□□□ -2.03
TPM1P09493 AC090453.1-201ENST00000495560 436 ntBASIC2.34□□□□□ -2.03
TPM1P09493 AC112518.2-201ENST00000508565 425 ntBASIC2.34□□□□□ -2.03
TPM1P09493 ANP32BP3-201ENST00000559213 706 ntBASIC2.34□□□□□ -2.03
TPM1P09493 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.34□□□□□ -2.03
TPM1P09493 AC234778.2-201ENST00000566241 354 ntBASIC2.34□□□□□ -2.03
TPM1P09493 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.34□□□□□ -2.03
TPM1P09493 MIR3199-1-201ENST00000582434 88 ntBASIC2.34□□□□□ -2.03
TPM1P09493 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.34□□□□□ -2.03
TPM1P09493 AP001542.2-201ENST00000593141 364 ntBASIC2.34□□□□□ -2.03
TPM1P09493 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.34□□□□□ -2.03
TPM1P09493 AC107214.2-201ENST00000608204 634 ntBASIC2.34□□□□□ -2.03
TPM1P09493 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
TPM1P09493 SNORA16B-201ENST00000364674 135 ntBASIC2.33□□□□□ -2.04
TPM1P09493 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TPM1P09493 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
TPM1P09493 MIR491-201ENST00000384877 84 ntBASIC2.33□□□□□ -2.04
TPM1P09493 SNRPEP2-201ENST00000397592 279 ntBASIC2.33□□□□□ -2.04
TPM1P09493 RNU2-33P-201ENST00000410344 192 ntBASIC2.33□□□□□ -2.04
TPM1P09493 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.33□□□□□ -2.04
TPM1P09493 AC007919.1-201ENST00000429380 217 ntBASIC2.33□□□□□ -2.04
TPM1P09493 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.33□□□□□ -2.04
TPM1P09493 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.33□□□□□ -2.04
TPM1P09493 RPS29P20-201ENST00000489592 171 ntBASIC2.33□□□□□ -2.04
TPM1P09493 OR4G11P-201ENST00000492842 939 ntBASIC2.33□□□□□ -2.04
TPM1P09493 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.33□□□□□ -2.04
TPM1P09493 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.33□□□□□ -2.04
TPM1P09493 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.33□□□□□ -2.04
TPM1P09493 RNU7-193P-201ENST00000516723 65 ntBASIC2.33□□□□□ -2.04
TPM1P09493 HSPA8P13-201ENST00000523715 472 ntBASIC2.33□□□□□ -2.04
TPM1P09493 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
TPM1P09493 HSPE1P3-201ENST00000559254 309 ntBASIC2.33□□□□□ -2.04
TPM1P09493 AC100814.1-201ENST00000606963 623 ntBASIC2.33□□□□□ -2.04
TPM1P09493 AC013476.2-201ENST00000614456 459 ntBASIC2.33□□□□□ -2.04
TPM1P09493 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
TPM1P09493 AP001002.2-201ENST00000625137 386 ntBASIC2.33□□□□□ -2.04
TPM1P09493 MIR7157-201ENST00000635801 60 ntBASIC2.33□□□□□ -2.04
TPM1P09493 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TPM1P09493 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TPM1P09493 ANKRD36P1-201ENST00000344424 659 ntBASIC2.32□□□□□ -2.04
TPM1P09493 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TPM1P09493 BX664727.1-201ENST00000416024 466 ntBASIC2.32□□□□□ -2.04
TPM1P09493 AC027644.1-201ENST00000419595 298 ntBASIC2.32□□□□□ -2.04
TPM1P09493 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.32□□□□□ -2.04
TPM1P09493 MTCYBP45-201ENST00000435243 565 ntBASIC2.32□□□□□ -2.04
TPM1P09493 MTCO3P43-201ENST00000440974 771 ntBASIC2.32□□□□□ -2.04
TPM1P09493 RPS20P20-201ENST00000460498 340 ntBASIC2.32□□□□□ -2.04
TPM1P09493 AC128713.1-201ENST00000471495 306 ntBASIC2.32□□□□□ -2.04
TPM1P09493 AC072039.1-201ENST00000477611 581 ntBASIC2.32□□□□□ -2.04
TPM1P09493 RNU4-29P-201ENST00000515943 174 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms