Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CBX3P7-201ENST00000532876 502 ntBASIC0.66□□□□□ -2.3
APOBP04114 RPS15AP11-201ENST00000594193 385 ntBASIC0.66□□□□□ -2.3
APOBP04114 DUXAP3-201ENST00000603616 594 ntBASIC0.66□□□□□ -2.3
APOBP04114 MIR6840-201ENST00000611937 71 ntBASIC0.66□□□□□ -2.3
APOBP04114 AC073592.7-201ENST00000623659 507 ntBASIC0.66□□□□□ -2.3
APOBP04114 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
APOBP04114 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
APOBP04114 RPL31P35-201ENST00000431058 377 ntBASIC0.66□□□□□ -2.3
APOBP04114 HMGB3P30-201ENST00000457863 606 ntBASIC0.66□□□□□ -2.3
APOBP04114 RPL37P25-201ENST00000507308 276 ntBASIC0.66□□□□□ -2.3
APOBP04114 AC103833.1-201ENST00000517442 172 ntBASIC0.66□□□□□ -2.3
APOBP04114 MTCO1P47-201ENST00000523889 1271 ntBASIC0.66□□□□□ -2.3
APOBP04114 AP002907.1-201ENST00000606361 1430 ntBASIC0.66□□□□□ -2.3
APOBP04114 Y_RNA.294-201ENST00000364916 102 ntBASIC0.65□□□□□ -2.3
APOBP04114 TATDN1P1-201ENST00000414123 891 ntBASIC0.65□□□□□ -2.3
APOBP04114 RPL21P90-201ENST00000415692 466 ntBASIC0.65□□□□□ -2.3
APOBP04114 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC0.65□□□□□ -2.3
APOBP04114 SDCBPP1-201ENST00000440192 890 ntBASIC0.65□□□□□ -2.3
APOBP04114 AC243772.1-201ENST00000451620 410 ntBASIC0.65□□□□□ -2.3
APOBP04114 RPL21P104-201ENST00000464143 478 ntBASIC0.65□□□□□ -2.3
APOBP04114 AC022880.1-201ENST00000534017 973 ntBASIC0.65□□□□□ -2.3
APOBP04114 MTCO1P40-201ENST00000574371 625 ntBASIC0.65□□□□□ -2.3
APOBP04114 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.65□□□□□ -2.3
APOBP04114 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.65□□□□□ -2.3
APOBP04114 RNU4-38P-201ENST00000364472 129 ntBASIC0.65□□□□□ -2.31
APOBP04114 Y_RNA.303-201ENST00000364998 94 ntBASIC0.65□□□□□ -2.31
APOBP04114 RPL30P4-201ENST00000429309 333 ntBASIC0.65□□□□□ -2.31
APOBP04114 HMGB3P21-201ENST00000452483 547 ntBASIC0.65□□□□□ -2.31
APOBP04114 AC090096.1-201ENST00000489168 390 ntBASIC0.65□□□□□ -2.31
APOBP04114 SNORA67.1-201ENST00000364749 141 ntBASIC0.65□□□□□ -2.31
APOBP04114 Y_RNA.471-201ENST00000384312 102 ntBASIC0.65□□□□□ -2.31
APOBP04114 Z86062.1-201ENST00000406773 777 ntBASIC0.65□□□□□ -2.31
APOBP04114 AC096632.1-201ENST00000427395 310 ntBASIC0.65□□□□□ -2.31
APOBP04114 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC0.65□□□□□ -2.31
APOBP04114 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.65□□□□□ -2.31
APOBP04114 ARPC3P2-201ENST00000457786 533 ntBASIC0.65□□□□□ -2.31
APOBP04114 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.65□□□□□ -2.31
APOBP04114 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.65□□□□□ -2.31
APOBP04114 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.65□□□□□ -2.31
APOBP04114 AL390240.1-201ENST00000612950 384 ntBASIC0.65□□□□□ -2.31
APOBP04114 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.65□□□□□ -2.31
APOBP04114 ZNF734P-201ENST00000419494 1534 ntBASIC0.65□□□□□ -2.31
APOBP04114 AC130650.2-201ENST00000618736 2403 ntBASIC0.65□□□□□ -2.31
APOBP04114 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.65□□□□□ -2.31
APOBP04114 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
APOBP04114 Y_RNA.60-201ENST00000362831 98 ntBASIC0.65□□□□□ -2.31
APOBP04114 AC016769.3-201ENST00000396562 315 ntBASIC0.65□□□□□ -2.31
APOBP04114 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.65□□□□□ -2.31
APOBP04114 ARF4P4-201ENST00000439608 520 ntBASIC0.65□□□□□ -2.31
APOBP04114 AC079776.3-201ENST00000450665 370 ntBASIC0.65□□□□□ -2.31
APOBP04114 AL035407.2-201ENST00000454090 378 ntBASIC0.65□□□□□ -2.31
APOBP04114 AL163153.1-201ENST00000554223 283 ntBASIC0.65□□□□□ -2.31
APOBP04114 AC079597.1-201ENST00000624306 508 ntBASIC0.65□□□□□ -2.31
APOBP04114 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.65□□□□□ -2.31
APOBP04114 AL390862.1-201ENST00000635467 1469 ntBASIC0.65□□□□□ -2.31
APOBP04114 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
APOBP04114 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
APOBP04114 AC138915.1-201ENST00000565427 1685 ntBASIC0.64□□□□□ -2.31
APOBP04114 RNU2-41P-201ENST00000410991 178 ntBASIC0.64□□□□□ -2.31
APOBP04114 AC015922.2-201ENST00000435593 184 ntBASIC0.64□□□□□ -2.31
APOBP04114 RPL17P49-201ENST00000443728 411 ntBASIC0.64□□□□□ -2.31
APOBP04114 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC0.64□□□□□ -2.31
APOBP04114 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC0.64□□□□□ -2.31
APOBP04114 AP005597.4-201ENST00000526762 229 ntBASIC0.64□□□□□ -2.31
APOBP04114 AC006270.3-201ENST00000605967 1036 ntBASIC0.64□□□□□ -2.31
APOBP04114 RNU6-222P-201ENST00000362438 107 ntBASIC0.64□□□□□ -2.31
APOBP04114 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.64□□□□□ -2.31
APOBP04114 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.64□□□□□ -2.31
APOBP04114 RNA5SP330-201ENST00000517096 96 ntBASIC0.64□□□□□ -2.31
APOBP04114 AL161713.1-201ENST00000555538 145 ntBASIC0.64□□□□□ -2.31
APOBP04114 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.64□□□□□ -2.31
APOBP04114 AL442644.1-201ENST00000454390 3105 ntBASIC0.64□□□□□ -2.31
APOBP04114 AL512504.1-201ENST00000415494 778 ntBASIC0.64□□□□□ -2.31
APOBP04114 AL591212.2-201ENST00000433923 257 ntBASIC0.64□□□□□ -2.31
APOBP04114 AL500527.1-201ENST00000448532 255 ntBASIC0.64□□□□□ -2.31
APOBP04114 RPS27P1-201ENST00000450552 247 ntBASIC0.64□□□□□ -2.31
APOBP04114 SNX5P1-201ENST00000505757 1041 ntBASIC0.64□□□□□ -2.31
APOBP04114 AC110792.2-201ENST00000510278 224 ntBASIC0.64□□□□□ -2.31
APOBP04114 SNORA31.16-201ENST00000516773 139 ntBASIC0.64□□□□□ -2.31
APOBP04114 SMARCE1P4-201ENST00000523647 241 ntBASIC0.64□□□□□ -2.31
APOBP04114 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.64□□□□□ -2.31
APOBP04114 MTND4P34-201ENST00000572715 1371 ntBASIC0.64□□□□□ -2.31
APOBP04114 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.64□□□□□ -2.31
APOBP04114 HSPE1P26-201ENST00000405341 275 ntBASIC0.64□□□□□ -2.31
APOBP04114 RPS29P23-201ENST00000458635 123 ntBASIC0.64□□□□□ -2.31
APOBP04114 BTF3P12-201ENST00000519620 469 ntBASIC0.64□□□□□ -2.31
APOBP04114 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.64□□□□□ -2.31
APOBP04114 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.64□□□□□ -2.31
APOBP04114 AP003117.1-201ENST00000602771 554 ntBASIC0.64□□□□□ -2.31
APOBP04114 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
APOBP04114 AC009318.3-201ENST00000616916 503 ntBASIC0.64□□□□□ -2.31
APOBP04114 CFTRP2-201ENST00000634304 199 ntBASIC0.64□□□□□ -2.31
APOBP04114 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
APOBP04114 SNORA51.2-201ENST00000364595 132 ntBASIC0.63□□□□□ -2.31
APOBP04114 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.63□□□□□ -2.31
APOBP04114 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.63□□□□□ -2.31
APOBP04114 Z96811.1-201ENST00000445880 108 ntBASIC0.63□□□□□ -2.31
APOBP04114 RNA5SP233-201ENST00000459153 113 ntBASIC0.63□□□□□ -2.31
APOBP04114 NAP1L1P3-201ENST00000462291 880 ntBASIC0.63□□□□□ -2.31
APOBP04114 MRPL42P6-201ENST00000486397 371 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms