Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.12□□□□□ -2.07
MT-ND4P03905 AC092155.2-201ENST00000454675 477 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 MTATP6P14-201ENST00000455189 673 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 AC233279.1-201ENST00000455300 423 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 AC087588.1-201ENST00000462203 316 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 MTND1P16-201ENST00000465177 898 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 MRPL42P6-201ENST00000486397 371 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MT-ND4P03905 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.12□□□□□ -2.07
MT-ND4P03905 AC021146.8-201ENST00000507455 733 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 AC079395.1-201ENST00000510981 262 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 AC034159.1-201ENST00000513885 583 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 AP003467.2-201ENST00000520175 319 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 COX6CP5-201ENST00000527162 228 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 AP002748.2-201ENST00000528671 348 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.12□□□□□ -2.07
MT-ND4P03905 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.12□□□□□ -2.07
MT-ND4P03905 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.12□□□□□ -2.07
MT-ND4P03905 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.12□□□□□ -2.07
MT-ND4P03905 AC006270.3-201ENST00000605967 1036 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 AL121652.1-201ENST00000608851 448 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
MT-ND4P03905 AC107075.1-201ENST00000613695 314 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 HMGB1P24-202ENST00000615653 685 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 AC073308.1-201ENST00000623696 305 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 AL159972.1-201ENST00000625150 448 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 AC116618.1-201ENST00000634617 774 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 ZNF720P1-201ENST00000562403 1939 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 ZNF833P-201ENST00000424938 1494 ntBASIC2.12□□□□□ -2.07
MT-ND4P03905 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
MT-ND4P03905 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
MT-ND4P03905 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
MT-ND4P03905 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
MT-ND4P03905 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MT-ND4P03905 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
MT-ND4P03905 GNG5P1-201ENST00000255500 204 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 OR5J1P-201ENST00000313544 939 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 Y_RNA.192-201ENST00000363977 102 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 SNORA68.1-201ENST00000364537 132 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 Y_RNA.311-201ENST00000365068 96 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 RNU1-39P-201ENST00000383897 165 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 RNU6-637P-201ENST00000384050 107 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 RNU6-114P-201ENST00000384704 105 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 MIR491-201ENST00000384877 84 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 MIR524-201ENST00000385242 87 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 MIR767-201ENST00000390228 109 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 AL136310.1-201ENST00000404926 654 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.11□□□□□ -2.07
MT-ND4P03905 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MT-ND4P03905 RNU4-22P-201ENST00000411058 166 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.11□□□□□ -2.07
MT-ND4P03905 RPS3AP37-201ENST00000419176 745 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 AC091390.3-201ENST00000426478 338 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 ZYG11AP1-201ENST00000430329 837 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 ATP5F1P1-201ENST00000433775 569 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 CBWD4P-201ENST00000445695 655 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 BMI1P1-201ENST00000445879 941 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 IFNA11P-201ENST00000446352 526 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 EEF1E1P1-201ENST00000446998 430 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 AP000936.2-201ENST00000447151 681 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.11□□□□□ -2.07
MT-ND4P03905 SNORD109B-201ENST00000458961 67 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 RNU7-26P-201ENST00000458980 63 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 SNORD109A-201ENST00000459128 67 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 MEMO1P3-201ENST00000459811 302 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 AC021382.1-201ENST00000483523 359 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.11□□□□□ -2.07
MT-ND4P03905 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.11□□□□□ -2.07
MT-ND4P03905 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.11□□□□□ -2.07
MT-ND4P03905 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.11□□□□□ -2.07
MT-ND4P03905 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
MT-ND4P03905 AC021451.1-201ENST00000523498 1129 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
MT-ND4P03905 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 AC007115.1-201ENST00000546853 234 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.11□□□□□ -2.07
MT-ND4P03905 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.11□□□□□ -2.07
MT-ND4P03905 AL158050.2-201ENST00000605336 568 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 ATP1B3P1-201ENST00000605365 821 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MT-ND4P03905 AC004852.3-201ENST00000614131 326 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 AP001002.2-201ENST00000625137 386 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 CU459211.1-201ENST00000635667 749 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 AC011477.1-204ENST00000623416 1325 ntBASIC2.11□□□□□ -2.07
MT-ND4P03905 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
MT-ND4P03905 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MT-ND4P03905 AC009902.3-201ENST00000606235 2172 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
MT-ND4P03905 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 RNU6-859P-201ENST00000362728 107 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 RNA5SP456-201ENST00000364002 114 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 RNU6-289P-201ENST00000364093 107 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 RNA5SP387-201ENST00000364226 106 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 RNU6-777P-201ENST00000364265 104 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 Y_RNA.333-201ENST00000365274 102 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 SNORA70.4-201ENST00000365509 134 ntBASIC2.1□□□□□ -2.07
MT-ND4P03905 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
MT-ND4P03905 MIR122-201ENST00000385044 85 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms