Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.09□□□□□ -2.07
APOEP02649 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.09□□□□□ -2.07
APOEP02649 AC093510.2-201ENST00000562820 896 ntBASIC2.09□□□□□ -2.07
APOEP02649 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.09□□□□□ -2.07
APOEP02649 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.09□□□□□ -2.07
APOEP02649 AC116312.1-201ENST00000606841 314 ntBASIC2.09□□□□□ -2.07
APOEP02649 AC016911.1-201ENST00000613297 452 ntBASIC2.09□□□□□ -2.07
APOEP02649 AL162373.1-201ENST00000620433 407 ntBASIC2.09□□□□□ -2.07
APOEP02649 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
APOEP02649 AC104820.1-201ENST00000624183 307 ntBASIC2.09□□□□□ -2.07
APOEP02649 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.09□□□□□ -2.08
APOEP02649 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.09□□□□□ -2.08
APOEP02649 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
APOEP02649 MTND5P29-201ENST00000458676 1807 ntBASIC2.08□□□□□ -2.08
APOEP02649 RNU5A-1-201ENST00000362698 116 ntBASIC2.08□□□□□ -2.08
APOEP02649 SNORD114-1-201ENST00000362705 72 ntBASIC2.08□□□□□ -2.08
APOEP02649 RN7SKP226-201ENST00000364912 300 ntBASIC2.08□□□□□ -2.08
APOEP02649 AL079342.1-201ENST00000401460 267 ntBASIC2.08□□□□□ -2.08
APOEP02649 GSTA9P-201ENST00000406231 611 ntBASIC2.08□□□□□ -2.08
APOEP02649 RPS7P9-201ENST00000414704 586 ntBASIC2.08□□□□□ -2.08
APOEP02649 USP12PX-201ENST00000432383 1057 ntBASIC2.08□□□□□ -2.08
APOEP02649 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.08□□□□□ -2.08
APOEP02649 USP9YP8-201ENST00000441913 500 ntBASIC2.08□□□□□ -2.08
APOEP02649 RNA5SP233-201ENST00000459153 113 ntBASIC2.08□□□□□ -2.08
APOEP02649 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.08□□□□□ -2.08
APOEP02649 LARP1BP2-201ENST00000486594 519 ntBASIC2.08□□□□□ -2.08
APOEP02649 COX7A2P2-201ENST00000505291 250 ntBASIC2.08□□□□□ -2.08
APOEP02649 RNU5A-7P-201ENST00000515979 116 ntBASIC2.08□□□□□ -2.08
APOEP02649 RNU6-1282P-201ENST00000516735 96 ntBASIC2.08□□□□□ -2.08
APOEP02649 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
APOEP02649 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.08□□□□□ -2.08
APOEP02649 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.08□□□□□ -2.08
APOEP02649 AL445493.3-201ENST00000619568 477 ntBASIC2.08□□□□□ -2.08
APOEP02649 AL049641.1-201ENST00000441055 1948 ntBASIC2.08□□□□□ -2.08
APOEP02649 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.08□□□□□ -2.08
APOEP02649 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
APOEP02649 CCT4P2-201ENST00000233836 1548 ntBASIC2.07□□□□□ -2.08
APOEP02649 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
APOEP02649 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
APOEP02649 RNU6-878P-201ENST00000384578 110 ntBASIC2.07□□□□□ -2.08
APOEP02649 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.07□□□□□ -2.08
APOEP02649 AC246680.2-201ENST00000422106 389 ntBASIC2.07□□□□□ -2.08
APOEP02649 NDUFB4P7-201ENST00000423198 363 ntBASIC2.07□□□□□ -2.08
APOEP02649 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.07□□□□□ -2.08
APOEP02649 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.07□□□□□ -2.08
APOEP02649 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.07□□□□□ -2.08
APOEP02649 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.07□□□□□ -2.08
APOEP02649 BMI1P1-201ENST00000445879 941 ntBASIC2.07□□□□□ -2.08
APOEP02649 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.07□□□□□ -2.08
APOEP02649 AL049874.1-201ENST00000489560 388 ntBASIC2.07□□□□□ -2.08
APOEP02649 AC118942.1-201ENST00000529674 1035 ntBASIC2.07□□□□□ -2.08
APOEP02649 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.07□□□□□ -2.08
APOEP02649 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.07□□□□□ -2.08
APOEP02649 AC093519.1-201ENST00000566109 298 ntBASIC2.07□□□□□ -2.08
APOEP02649 HMGN2P15-201ENST00000585707 270 ntBASIC2.07□□□□□ -2.08
APOEP02649 AC107214.2-201ENST00000608204 634 ntBASIC2.07□□□□□ -2.08
APOEP02649 AC068057.2-201ENST00000624047 895 ntBASIC2.07□□□□□ -2.08
APOEP02649 AC091932.3-201ENST00000624223 323 ntBASIC2.07□□□□□ -2.08
APOEP02649 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.07□□□□□ -2.08
APOEP02649 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.07□□□□□ -2.08
APOEP02649 DDX10P1-201ENST00000448545 1933 ntBASIC2.07□□□□□ -2.08
APOEP02649 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
APOEP02649 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
APOEP02649 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
APOEP02649 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
APOEP02649 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.06□□□□□ -2.08
APOEP02649 CBWD4P-201ENST00000445695 655 ntBASIC2.06□□□□□ -2.08
APOEP02649 MTCO1P48-201ENST00000448024 1096 ntBASIC2.06□□□□□ -2.08
APOEP02649 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.06□□□□□ -2.08
APOEP02649 TRGVB-201ENST00000453257 471 ntBASIC2.06□□□□□ -2.08
APOEP02649 ANKRD26P4-201ENST00000455755 950 ntBASIC2.06□□□□□ -2.08
APOEP02649 CDC42P1-201ENST00000456658 548 ntBASIC2.06□□□□□ -2.08
APOEP02649 AC068587.2-201ENST00000478386 781 ntBASIC2.06□□□□□ -2.08
APOEP02649 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.06□□□□□ -2.08
APOEP02649 RNU6-1256P-201ENST00000516539 103 ntBASIC2.06□□□□□ -2.08
APOEP02649 FAM92A1P1-201ENST00000528023 890 ntBASIC2.06□□□□□ -2.08
APOEP02649 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
APOEP02649 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.06□□□□□ -2.08
APOEP02649 AC090502.2-201ENST00000549267 280 ntBASIC2.06□□□□□ -2.08
APOEP02649 HSPE1P3-201ENST00000559254 309 ntBASIC2.06□□□□□ -2.08
APOEP02649 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.06□□□□□ -2.08
APOEP02649 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.06□□□□□ -2.08
APOEP02649 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.06□□□□□ -2.08
APOEP02649 TUG1_1.1-201ENST00000610654 145 ntBASIC2.06□□□□□ -2.08
APOEP02649 AC244517.12-201ENST00000623581 663 ntBASIC2.06□□□□□ -2.08
APOEP02649 AC080128.1-201ENST00000474389 1917 ntBASIC2.06□□□□□ -2.08
APOEP02649 ZNF355P-201ENST00000427301 3216 ntBASIC2.06□□□□□ -2.08
APOEP02649 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOEP02649 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOEP02649 RNU6-220P-201ENST00000390919 107 ntBASIC2.05□□□□□ -2.08
APOEP02649 AC019129.1-201ENST00000403786 261 ntBASIC2.05□□□□□ -2.08
APOEP02649 RNU2-2P-201ENST00000410396 191 ntBASIC2.05□□□□□ -2.08
APOEP02649 RN7SKP284-201ENST00000411002 343 ntBASIC2.05□□□□□ -2.08
APOEP02649 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.05□□□□□ -2.08
APOEP02649 CR848007.2-201ENST00000424918 787 ntBASIC2.05□□□□□ -2.08
APOEP02649 RAC1P8-201ENST00000427086 527 ntBASIC2.05□□□□□ -2.08
APOEP02649 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.05□□□□□ -2.08
APOEP02649 AL121890.1-201ENST00000435457 205 ntBASIC2.05□□□□□ -2.08
APOEP02649 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOEP02649 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms