Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDB3O75112 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
LDB3O75112 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDB3O75112 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LDB3O75112 SNORD56.2-201ENST00000363242 71 ntBASIC3.38□□□□□ -1.87
LDB3O75112 SNORA62.3-201ENST00000365110 153 ntBASIC3.38□□□□□ -1.87
LDB3O75112 Y_RNA.356-201ENST00000365475 113 ntBASIC3.38□□□□□ -1.87
LDB3O75112 RNU1-39P-201ENST00000383897 165 ntBASIC3.38□□□□□ -1.87
LDB3O75112 RNU6-1011P-201ENST00000384668 107 ntBASIC3.38□□□□□ -1.87
LDB3O75112 snosnR66.1-201ENST00000391095 99 ntBASIC3.38□□□□□ -1.87
LDB3O75112 RPL23AP32-201ENST00000395315 459 ntBASIC3.38□□□□□ -1.87
LDB3O75112 HMGN1P24-201ENST00000412282 298 ntBASIC3.38□□□□□ -1.87
LDB3O75112 EEF1A1P40-201ENST00000412883 573 ntBASIC3.38□□□□□ -1.87
LDB3O75112 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB3O75112 ZNF90P2-204ENST00000419323 1075 ntBASIC3.38□□□□□ -1.87
LDB3O75112 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.38□□□□□ -1.87
LDB3O75112 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB3O75112 RPL21P66-201ENST00000426566 466 ntBASIC3.38□□□□□ -1.87
LDB3O75112 RPL7P28-201ENST00000437739 740 ntBASIC3.38□□□□□ -1.87
LDB3O75112 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB3O75112 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.38□□□□□ -1.87
LDB3O75112 ELOCP23-201ENST00000452014 332 ntBASIC3.38□□□□□ -1.87
LDB3O75112 SNORA84-201ENST00000459229 133 ntBASIC3.38□□□□□ -1.87
LDB3O75112 RPS3AP50-201ENST00000487064 803 ntBASIC3.38□□□□□ -1.87
LDB3O75112 AP001086.1-201ENST00000494882 321 ntBASIC3.38□□□□□ -1.87
LDB3O75112 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB3O75112 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.38□□□□□ -1.87
LDB3O75112 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.38□□□□□ -1.87
LDB3O75112 HPRT1P3-201ENST00000539521 576 ntBASIC3.38□□□□□ -1.87
LDB3O75112 AC018630.1-201ENST00000541376 925 ntBASIC3.38□□□□□ -1.87
LDB3O75112 AL512310.1-201ENST00000548639 172 ntBASIC3.38□□□□□ -1.87
LDB3O75112 RPS3AP23-202ENST00000574601 686 ntBASIC3.38□□□□□ -1.87
LDB3O75112 MIR3690-201ENST00000580266 75 ntBASIC3.38□□□□□ -1.87
LDB3O75112 AC005261.5-201ENST00000596280 355 ntBASIC3.38□□□□□ -1.87
LDB3O75112 AC012669.1-201ENST00000603209 283 ntBASIC3.38□□□□□ -1.87
LDB3O75112 AC006254.3-201ENST00000603353 884 ntBASIC3.38□□□□□ -1.87
LDB3O75112 AC025449.1-201ENST00000603896 529 ntBASIC3.38□□□□□ -1.87
LDB3O75112 AC010591.1-201ENST00000603941 649 ntBASIC3.38□□□□□ -1.87
LDB3O75112 AC005858.4-201ENST00000623191 700 ntBASIC3.38□□□□□ -1.87
LDB3O75112 FER-210ENST00000628534 558 ntTSL 5 BASIC3.38□□□□□ -1.87
LDB3O75112 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDB3O75112 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LDB3O75112 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDB3O75112 AL133383.2-201ENST00000622958 2336 ntBASIC3.38□□□□□ -1.87
LDB3O75112 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDB3O75112 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
LDB3O75112 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
LDB3O75112 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LDB3O75112 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.38□□□□□ -1.87
LDB3O75112 GABPAP-201ENST00000419271 1356 ntBASIC3.38□□□□□ -1.87
LDB3O75112 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LDB3O75112 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.37□□□□□ -1.87
LDB3O75112 MTND5P17-201ENST00000418405 1603 ntBASIC3.37□□□□□ -1.87
LDB3O75112 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LDB3O75112 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LDB3O75112 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LDB3O75112 RNY3P3-201ENST00000363816 102 ntBASIC3.37□□□□□ -1.87
LDB3O75112 RNU6-1078P-201ENST00000364522 103 ntBASIC3.37□□□□□ -1.87
LDB3O75112 RNU6-283P-201ENST00000364788 107 ntBASIC3.37□□□□□ -1.87
LDB3O75112 SNORA73.2-201ENST00000364946 201 ntBASIC3.37□□□□□ -1.87
LDB3O75112 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
LDB3O75112 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LDB3O75112 Y_RNA.394-201ENST00000383942 103 ntBASIC3.37□□□□□ -1.87
LDB3O75112 MIR3074-201ENST00000384885 81 ntBASIC3.37□□□□□ -1.87
LDB3O75112 PTMAP2-201ENST00000397627 327 ntBASIC3.37□□□□□ -1.87
LDB3O75112 AL391417.1-201ENST00000404100 426 ntBASIC3.37□□□□□ -1.87
LDB3O75112 OR9R1P-201ENST00000412200 877 ntBASIC3.37□□□□□ -1.87
LDB3O75112 SYF2P2-201ENST00000417620 583 ntBASIC3.37□□□□□ -1.87
LDB3O75112 DBIP2-201ENST00000419076 262 ntBASIC3.37□□□□□ -1.87
LDB3O75112 PDCL2P1-201ENST00000419302 352 ntBASIC3.37□□□□□ -1.87
LDB3O75112 AL137014.1-201ENST00000420490 1226 ntBASIC3.37□□□□□ -1.87
LDB3O75112 BEND7P1-201ENST00000422058 457 ntBASIC3.37□□□□□ -1.87
LDB3O75112 AC008850.1-201ENST00000427546 362 ntBASIC3.37□□□□□ -1.87
LDB3O75112 RPL23AP30-201ENST00000432419 501 ntBASIC3.37□□□□□ -1.87
LDB3O75112 AL606489.2-201ENST00000433886 234 ntBASIC3.37□□□□□ -1.87
LDB3O75112 VDAC1P3-201ENST00000434069 851 ntBASIC3.37□□□□□ -1.87
LDB3O75112 RAC1P7-201ENST00000445367 377 ntBASIC3.37□□□□□ -1.87
LDB3O75112 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB3O75112 RPL23AP20-201ENST00000447965 421 ntBASIC3.37□□□□□ -1.87
LDB3O75112 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB3O75112 RPL9P32-201ENST00000464118 620 ntBASIC3.37□□□□□ -1.87
LDB3O75112 AC010587.1-201ENST00000505809 469 ntBASIC3.37□□□□□ -1.87
LDB3O75112 AC010493.1-201ENST00000513479 292 ntBASIC3.37□□□□□ -1.87
LDB3O75112 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB3O75112 LRRC34P2-201ENST00000514850 553 ntBASIC3.37□□□□□ -1.87
LDB3O75112 RNU6-1095P-201ENST00000516148 108 ntBASIC3.37□□□□□ -1.87
LDB3O75112 Vault.3-201ENST00000516676 95 ntBASIC3.37□□□□□ -1.87
LDB3O75112 RNU6-835P-201ENST00000516974 104 ntBASIC3.37□□□□□ -1.87
LDB3O75112 RANP9-201ENST00000519957 271 ntBASIC3.37□□□□□ -1.87
LDB3O75112 AC103783.1-201ENST00000520506 373 ntBASIC3.37□□□□□ -1.87
LDB3O75112 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB3O75112 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.37□□□□□ -1.87
LDB3O75112 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.37□□□□□ -1.87
LDB3O75112 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB3O75112 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB3O75112 AL359212.1-201ENST00000556608 614 ntBASIC3.37□□□□□ -1.87
LDB3O75112 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB3O75112 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.37□□□□□ -1.87
LDB3O75112 AC087045.1-201ENST00000605856 382 ntBASIC3.37□□□□□ -1.87
LDB3O75112 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms