Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNA5SP99-201ENST00000364020 114 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 RNU6-270P-201ENST00000364131 105 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AL513475.1-201ENST00000406602 315 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 RPS3AP24-201ENST00000407896 734 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 RN7SKP140-201ENST00000411196 284 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AC007064.1-201ENST00000412238 351 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.23□□□□□ -2.05
SHOX2O60902 SPA17P1-201ENST00000416656 452 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AC098614.2-201ENST00000426040 255 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.23□□□□□ -2.05
SHOX2O60902 OR4K11P-201ENST00000431829 904 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 MTND2P5-201ENST00000432656 1006 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 MTCYBP15-201ENST00000433123 1127 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AL512844.2-201ENST00000433990 593 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AC009296.1-201ENST00000443146 155 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.23□□□□□ -2.05
SHOX2O60902 SNRPGP9-201ENST00000456025 225 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AC078857.1-201ENST00000469870 667 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 MRPL42P6-201ENST00000486397 371 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.23□□□□□ -2.05
SHOX2O60902 AC113155.1-201ENST00000511141 769 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AC008549.1-201ENST00000512900 643 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.23□□□□□ -2.05
SHOX2O60902 RNU6-928P-201ENST00000516876 104 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 RNA5SP471-201ENST00000516971 106 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.23□□□□□ -2.05
SHOX2O60902 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.23□□□□□ -2.05
SHOX2O60902 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.23□□□□□ -2.05
SHOX2O60902 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.23□□□□□ -2.05
SHOX2O60902 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.23□□□□□ -2.05
SHOX2O60902 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.23□□□□□ -2.05
SHOX2O60902 OR4K8P-201ENST00000578842 1048 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.23□□□□□ -2.05
SHOX2O60902 AL592148.2-201ENST00000612210 372 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AC090132.2-201ENST00000615881 347 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AL353997.5-201ENST00000618886 171 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 AC004009.2-201ENST00000623016 728 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SHOX2O60902 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.23□□□□□ -2.05
SHOX2O60902 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SHOX2O60902 AC097714.1-201ENST00000511272 1647 ntBASIC2.23□□□□□ -2.05
SHOX2O60902 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SHOX2O60902 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.23□□□□□ -2.05
SHOX2O60902 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.23□□□□□ -2.05
SHOX2O60902 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.22□□□□□ -2.05
SHOX2O60902 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHOX2O60902 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SHOX2O60902 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHOX2O60902 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.22□□□□□ -2.05
SHOX2O60902 Z85995.1-201ENST00000415547 335 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.22□□□□□ -2.05
SHOX2O60902 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.22□□□□□ -2.05
SHOX2O60902 UBE2D3P1-201ENST00000436669 444 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.22□□□□□ -2.05
SHOX2O60902 AL445687.1-201ENST00000439946 251 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 AL158053.1-201ENST00000441503 453 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.22□□□□□ -2.05
SHOX2O60902 AL500527.1-201ENST00000448532 255 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 RPS15AP27-201ENST00000449183 343 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.22□□□□□ -2.05
SHOX2O60902 RBM43P1-201ENST00000476891 1081 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.22□□□□□ -2.05
SHOX2O60902 ANXA2P1-201ENST00000505539 926 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.22□□□□□ -2.05
SHOX2O60902 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.22□□□□□ -2.05
SHOX2O60902 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.22□□□□□ -2.05
SHOX2O60902 ZNF971P-201ENST00000562068 1249 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 AL360085.1-201ENST00000604713 532 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 AC026741.1-201ENST00000605892 482 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.22□□□□□ -2.05
SHOX2O60902 AC080013.4-201ENST00000607624 649 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 AP001521.1-201ENST00000609150 300 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 AC079395.3-201ENST00000615161 484 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 AC092608.2-201ENST00000624427 218 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 AC099063.3-201ENST00000642066 185 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 AL049641.1-201ENST00000441055 1948 ntBASIC2.22□□□□□ -2.05
SHOX2O60902 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
SHOX2O60902 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHOX2O60902 RNU6-461P-201ENST00000364195 107 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 SNORA68.1-201ENST00000364537 132 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 XGY1-201ENST00000381172 446 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 RNU6-76P-201ENST00000384060 104 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 SUMO2P12-201ENST00000405924 140 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.21□□□□□ -2.06
SHOX2O60902 MTATP6P11-201ENST00000428071 670 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.21□□□□□ -2.06
SHOX2O60902 AL022578.1-201ENST00000439330 1433 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 FGF7P5-201ENST00000441829 291 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 MTCYBP3-201ENST00000445588 1137 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.21□□□□□ -2.06
SHOX2O60902 AL353691.1-201ENST00000451332 387 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.21□□□□□ -2.06
SHOX2O60902 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.21□□□□□ -2.06
SHOX2O60902 SCARNA15.2-201ENST00000516409 127 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 AC023632.1-201ENST00000518463 375 ntBASIC2.21□□□□□ -2.06
SHOX2O60902 OR5AQ1P-201ENST00000527596 927 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms