Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.72□□□□□ -1.97
MSH4O15457 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.72□□□□□ -1.97
MSH4O15457 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.72□□□□□ -1.97
MSH4O15457 AP003497.1-201ENST00000528472 562 ntBASIC2.72□□□□□ -1.97
MSH4O15457 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.72□□□□□ -1.97
MSH4O15457 MIR3609-201ENST00000582661 80 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.72□□□□□ -1.97
MSH4O15457 AC091057.2-201ENST00000602594 792 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AL158042.1-201ENST00000605338 460 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AC046143.2-201ENST00000609789 160 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AC090132.2-201ENST00000615881 347 ntBASIC2.72□□□□□ -1.97
MSH4O15457 RN7SL853P-201ENST00000617250 223 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AL603758.1-201ENST00000618654 241 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AC022960.3-201ENST00000619794 441 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.72□□□□□ -1.97
MSH4O15457 AC025034.2-201ENST00000623264 286 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AL159972.1-201ENST00000625150 448 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.72□□□□□ -1.97
MSH4O15457 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.72□□□□□ -1.97
MSH4O15457 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
MSH4O15457 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
MSH4O15457 OR4G2P-202ENST00000641004 1759 ntBASIC2.72□□□□□ -1.97
MSH4O15457 TPTE2P4-201ENST00000258589 1605 ntBASIC2.71□□□□□ -1.97
MSH4O15457 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.71□□□□□ -1.97
MSH4O15457 RNU6-637P-201ENST00000384050 107 ntBASIC2.71□□□□□ -1.98
MSH4O15457 SNORA41-201ENST00000384675 132 ntBASIC2.71□□□□□ -1.98
MSH4O15457 RNU6-114P-201ENST00000384704 105 ntBASIC2.71□□□□□ -1.98
MSH4O15457 MIR514A1-201ENST00000385133 98 ntBASIC2.71□□□□□ -1.98
MSH4O15457 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
MSH4O15457 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.71□□□□□ -1.98
MSH4O15457 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.71□□□□□ -1.98
MSH4O15457 AC018630.2-202ENST00000422992 927 ntBASIC2.71□□□□□ -1.98
MSH4O15457 RPL7L1P10-201ENST00000427790 463 ntBASIC2.71□□□□□ -1.98
MSH4O15457 AL590383.1-201ENST00000428602 75 ntBASIC2.71□□□□□ -1.98
MSH4O15457 AC104332.2-201ENST00000429959 156 ntBASIC2.71□□□□□ -1.98
MSH4O15457 MYL8P-204ENST00000431574 518 ntBASIC2.71□□□□□ -1.98
MSH4O15457 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.71□□□□□ -1.98
MSH4O15457 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.71□□□□□ -1.98
MSH4O15457 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.71□□□□□ -1.98
MSH4O15457 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.71□□□□□ -1.98
MSH4O15457 MTND2P24-201ENST00000453434 806 ntBASIC2.71□□□□□ -1.98
MSH4O15457 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.71□□□□□ -1.98
MSH4O15457 RPS27AP9-201ENST00000477681 438 ntBASIC2.71□□□□□ -1.98
MSH4O15457 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.71□□□□□ -1.98
MSH4O15457 RN7SL636P-201ENST00000497504 294 ntBASIC2.71□□□□□ -1.98
MSH4O15457 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.71□□□□□ -1.98
MSH4O15457 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.71□□□□□ -1.98
MSH4O15457 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.71□□□□□ -1.98
MSH4O15457 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.71□□□□□ -1.98
MSH4O15457 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.71□□□□□ -1.98
MSH4O15457 GLUD1P4-201ENST00000590914 418 ntBASIC2.71□□□□□ -1.98
MSH4O15457 AL596327.1-201ENST00000603629 213 ntBASIC2.71□□□□□ -1.98
MSH4O15457 AL627309.6-201ENST00000606857 840 ntBASIC2.71□□□□□ -1.98
MSH4O15457 AP000484.1-201ENST00000620067 1252 ntBASIC2.71□□□□□ -1.98
MSH4O15457 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
MSH4O15457 MIR1291-201ENST00000627649 87 ntBASIC2.71□□□□□ -1.98
MSH4O15457 AC092447.10-201ENST00000620607 1652 ntBASIC2.71□□□□□ -1.98
MSH4O15457 AC091564.4-201ENST00000533934 2194 ntBASIC2.71□□□□□ -1.98
MSH4O15457 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.71□□□□□ -1.98
MSH4O15457 AC233263.6-201ENST00000631132 1963 ntBASIC2.7□□□□□ -1.98
MSH4O15457 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
MSH4O15457 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.7□□□□□ -1.98
MSH4O15457 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.7□□□□□ -1.98
MSH4O15457 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
MSH4O15457 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
MSH4O15457 RPS4XP7-201ENST00000406274 780 ntBASIC2.7□□□□□ -1.98
MSH4O15457 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.7□□□□□ -1.98
MSH4O15457 NDUFB4P7-201ENST00000423198 363 ntBASIC2.7□□□□□ -1.98
MSH4O15457 TAAR7P-201ENST00000436141 242 ntBASIC2.7□□□□□ -1.98
MSH4O15457 RPS12P2-201ENST00000439728 269 ntBASIC2.7□□□□□ -1.98
MSH4O15457 AC009237.8-201ENST00000445492 379 ntBASIC2.7□□□□□ -1.98
MSH4O15457 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.7□□□□□ -1.98
MSH4O15457 AC010099.1-201ENST00000455434 375 ntBASIC2.7□□□□□ -1.98
MSH4O15457 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.7□□□□□ -1.98
MSH4O15457 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.7□□□□□ -1.98
MSH4O15457 AC104090.1-201ENST00000506341 1171 ntBASIC2.7□□□□□ -1.98
MSH4O15457 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.7□□□□□ -1.98
MSH4O15457 RNU6-1256P-201ENST00000516539 103 ntBASIC2.7□□□□□ -1.98
MSH4O15457 AC021269.2-201ENST00000532318 330 ntBASIC2.7□□□□□ -1.98
MSH4O15457 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
MSH4O15457 DNAJC8P1-201ENST00000554535 372 ntBASIC2.7□□□□□ -1.98
MSH4O15457 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
MSH4O15457 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.7□□□□□ -1.98
MSH4O15457 AC245884.10-201ENST00000597355 337 ntBASIC2.7□□□□□ -1.98
MSH4O15457 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.7□□□□□ -1.98
MSH4O15457 AC068313.1-201ENST00000604028 1008 ntBASIC2.7□□□□□ -1.98
MSH4O15457 AC013553.2-201ENST00000604244 589 ntBASIC2.7□□□□□ -1.98
MSH4O15457 AC112220.3-201ENST00000605502 502 ntBASIC2.7□□□□□ -1.98
MSH4O15457 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
MSH4O15457 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
MSH4O15457 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
MSH4O15457 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
MSH4O15457 AC087359.1-201ENST00000508335 1740 ntBASIC2.7□□□□□ -1.98
MSH4O15457 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.69□□□□□ -1.98
MSH4O15457 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
MSH4O15457 SNORA4.1-201ENST00000364263 144 ntBASIC2.69□□□□□ -1.98
MSH4O15457 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
MSH4O15457 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
MSH4O15457 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
MSH4O15457 MIR320C1-201ENST00000408566 88 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms