Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNVU1-14-201ENST00000384770 164 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 RN7SKP101-201ENST00000411376 320 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 EIF4EP2-201ENST00000422816 654 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AL590383.1-201ENST00000428602 75 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AL645568.3-201ENST00000433683 316 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 PTENP1-201ENST00000447117 1215 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 MTCO3P11-201ENST00000455103 774 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 HMGN2P23-201ENST00000456759 269 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 RN7SL542P-201ENST00000467147 294 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 RPL31P58-201ENST00000469001 379 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 PABPC1P3-201ENST00000469174 459 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AL358832.1-201ENST00000497800 389 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 SUMO1P1-201ENST00000497904 306 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC109471.1-201ENST00000511631 612 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC016550.3-201ENST00000515706 767 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 RN7SKP179-201ENST00000516126 217 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU6-27P-201ENST00000516146 107 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC136624.4-201ENST00000573044 370 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 MIR3160-1-201ENST00000577972 85 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC124283.4-201ENST00000581815 456 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 MIR4325-201ENST00000583049 90 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC015688.2-201ENST00000584523 262 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC125494.3-201ENST00000602759 455 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AP005212.4-201ENST00000614206 710 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC006213.4-201ENST00000616184 634 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC024581.2-201ENST00000619986 252 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 TEX41-300ENST00000631048 69 ntTSL 5 BASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 AC091812.1-201ENST00000432235 1948 ntBASIC0.85□□□□□ -2.27
CHKB-CPT1BH3BT56 MTND5P31-201ENST00000419366 1374 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 NUP58P1-201ENST00000502546 1738 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 MIR424-201ENST00000362227 98 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 SNORA44-201ENST00000384584 132 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 MCTS2P-201ENST00000394552 546 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 RNU6-272P-201ENST00000411028 104 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 LINC01347-201ENST00000417964 355 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 AC007742.1-201ENST00000425789 329 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 ELOCP26-201ENST00000436067 329 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 NUTF2P7-201ENST00000453086 375 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 AC015724.1-201ENST00000478577 156 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 OR5AK1P-201ENST00000524837 922 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 AC074051.3-201ENST00000570238 358 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 AP000403.1-201ENST00000603349 851 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 AP001485.1-201ENST00000604799 199 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 BNIP3P4-201ENST00000604946 565 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 AL138963.2-201ENST00000605137 226 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 FRG1HP-204ENST00000617940 757 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 AL356266.1-201ENST00000623311 483 ntBASIC0.84□□□□□ -2.27
CHKB-CPT1BH3BT56 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC0.84□□□□□ -2.28
CHKB-CPT1BH3BT56 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
CHKB-CPT1BH3BT56 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.28
CHKB-CPT1BH3BT56 AC007785.2-201ENST00000598627 1916 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 RNU6-670P-201ENST00000364312 104 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 RNU6-217P-201ENST00000384164 104 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 RNU6-921P-201ENST00000384361 107 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 MIR649-201ENST00000384843 97 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 MIR449B-201ENST00000384995 97 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 MIR320A-201ENST00000385302 82 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 SNORA40.19-201ENST00000390846 128 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 MIR1304-201ENST00000408243 91 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 SFR1P2-201ENST00000421841 730 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 BX276092.3-201ENST00000424182 230 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AL513185.2-201ENST00000425543 193 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 FO393419.3-201ENST00000428741 282 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AL121601.2-201ENST00000438019 707 ntBASIC0.83□□□□□ -2.28
CHKB-CPT1BH3BT56 AC009238.1-201ENST00000442165 424 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms