Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 DUXAP5-201ENST00000529668 529 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AP003385.6-201ENST00000531603 374 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 EEF1B2P4-201ENST00000551398 348 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC009063.1-201ENST00000563342 702 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC009712.1-201ENST00000564938 316 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC087481.2-201ENST00000565492 330 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC008751.2-201ENST00000597885 980 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 VN1R82P-201ENST00000601481 356 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 XIAPP1-201ENST00000603162 600 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL139344.1-201ENST00000605228 195 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC024560.3-201ENST00000608482 349 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL590282.1-201ENST00000610379 1136 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 TUSC7.1-201ENST00000610969 165 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC008147.4-201ENST00000617570 1204 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL445264.1-201ENST00000621719 171 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC099654.7-201ENST00000635788 2127 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TMX2-CTNND1H3BSU7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 U8.2-201ENST00000363156 134 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-777P-201ENST00000364265 104 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU1-100P-201ENST00000365255 165 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-1200P-201ENST00000384162 107 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 SNORD51-201ENST00000384320 80 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-821P-201ENST00000390995 107 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNA5SP210-201ENST00000391034 120 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL121972.1-201ENST00000402023 252 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC109780.2-201ENST00000413467 845 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 NPM1P11-201ENST00000417106 855 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 ZYG11AP1-201ENST00000430329 837 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 UBE2D3P1-201ENST00000436669 444 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 LSM1P1-201ENST00000438629 273 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 MTND5P14-201ENST00000441481 1267 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 MTND1P31-201ENST00000449206 961 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 USP9YP10-201ENST00000454868 628 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 RPS20P24-201ENST00000457473 361 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 snoU109.4-201ENST00000458953 143 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC026412.2-201ENST00000512270 1075 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNA5SP402-201ENST00000517148 110 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 MTATP6P15-201ENST00000527233 835 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC123904.3-201ENST00000547218 814 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 AP001029.3-201ENST00000588063 596 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL353748.2-201ENST00000622148 471 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL022578.1-201ENST00000439330 1433 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 DDX43P2-201ENST00000604753 1354 ntBASIC2.48□□□□□ -2.01
TMX2-CTNND1H3BSU7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC005539.1-201ENST00000443768 1479 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-799P-201ENST00000363567 107 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNVU1-3-201ENST00000364313 161 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 CYCSP45-201ENST00000402289 315 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNA5SP425-201ENST00000410336 112 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 USP9YP33-201ENST00000412220 421 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC107081.1-201ENST00000414975 361 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 RAD23BP2-201ENST00000416003 1207 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 USP9YP35-201ENST00000435696 412 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 CR769767.1-201ENST00000436337 346 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL008629.1-201ENST00000438615 184 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC011816.1-201ENST00000441346 546 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 MTCO3P11-201ENST00000455103 774 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 ANKRD26P4-201ENST00000455755 950 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 SUMO2P2-201ENST00000456482 255 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC004263.1-201ENST00000479327 332 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 RN7SKP24-201ENST00000515888 284 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU1-41P-201ENST00000516161 162 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU1-48P-201ENST00000516400 162 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 RNU6-1073P-201ENST00000517182 106 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 MIR4635-201ENST00000583759 79 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL596327.1-201ENST00000603629 213 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC018714.1-201ENST00000605028 208 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AL390208.1-201ENST00000605885 644 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC007490.1-201ENST00000624321 703 ntBASIC2.47□□□□□ -2.01
TMX2-CTNND1H3BSU7 AC120349.3-201ENST00000624377 529 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms