Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AP005137.2-201ENST00000609238 400 ntBASIC0.62□□□□□ -2.31
LINC01546A6NGU7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
LINC01546A6NGU7 AC245389.2-201ENST00000616023 576 ntBASIC0.62□□□□□ -2.31
LINC01546A6NGU7 AC018755.4-201ENST00000619715 454 ntBASIC0.62□□□□□ -2.31
LINC01546A6NGU7 OR4G11P-202ENST00000642116 1414 ntBASIC0.62□□□□□ -2.31
LINC01546A6NGU7 ICE2P2-201ENST00000483823 2787 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
LINC01546A6NGU7 MIR515-2-201ENST00000384883 83 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 MIR515-1-201ENST00000384884 83 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 MIR618-201ENST00000385287 98 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 RPS12P24-201ENST00000412619 387 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AL606490.8-201ENST00000441624 319 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 HMGN2P18-201ENST00000450680 270 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 RN7SKP210-201ENST00000459176 261 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AC132942.1-201ENST00000486753 483 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AC018630.1-201ENST00000541376 925 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AL731537.2-201ENST00000561565 951 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 MIR3198-2-201ENST00000577868 80 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.61□□□□□ -2.31
LINC01546A6NGU7 MIMT1-201ENST00000597105 1050 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC0.61□□□□□ -2.31
LINC01546A6NGU7 GMCL1P2-201ENST00000605230 823 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AC123912.5-201ENST00000605470 343 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AL161629.2-201ENST00000615347 275 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AC025588.4-201ENST00000615802 908 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AL353770.2-201ENST00000620024 78 ntBASIC0.61□□□□□ -2.31
LINC01546A6NGU7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.61□□□□□ -2.31
LINC01546A6NGU7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.61□□□□□ -2.31
LINC01546A6NGU7 RNU1-105P-201ENST00000363470 161 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 SNORA25.8-201ENST00000364831 128 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC236972.1-201ENST00000433225 199 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC092393.1-201ENST00000439625 742 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 RPL32P28-201ENST00000443577 397 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC087343.1-201ENST00000477341 475 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC068781.1-201ENST00000488231 618 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC098799.1-201ENST00000504752 800 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC004062.1-201ENST00000509926 645 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 OR5B19P-201ENST00000531766 928 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 FAM71BP1-201ENST00000604431 523 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AL355816.1-201ENST00000607951 118 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AL512598.1-201ENST00000610158 273 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 VN1R9P-201ENST00000614184 867 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC079395.3-201ENST00000615161 484 ntBASIC0.6□□□□□ -2.31
LINC01546A6NGU7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
LINC01546A6NGU7 NR1H5P-201ENST00000452683 1377 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
LINC01546A6NGU7 SNORA7.1-201ENST00000363750 139 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 MIR532-201ENST00000385025 91 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 SLC9B1P2-201ENST00000398120 1184 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 TANK-206ENST00000406287 875 ntTSL 5 BASIC0.59□□□□□ -2.31
LINC01546A6NGU7 RPS7P9-201ENST00000414704 586 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 AL121882.1-201ENST00000422893 417 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 RPL30P4-201ENST00000429309 333 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 RPS6P15-201ENST00000431996 751 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.59□□□□□ -2.31
LINC01546A6NGU7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
LINC01546A6NGU7 AC241584.1-201ENST00000438469 1241 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 RPL23AP16-201ENST00000441715 421 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 PTENP1-201ENST00000447117 1215 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 RPS27P1-201ENST00000450552 247 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC01546A6NGU7 DNAJC19P8-201ENST00000452887 259 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 snoU13.4-201ENST00000458916 104 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC0.59□□□□□ -2.31
LINC01546A6NGU7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.59□□□□□ -2.31
LINC01546A6NGU7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC01546A6NGU7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
LINC01546A6NGU7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.59□□□□□ -2.31
LINC01546A6NGU7 AC019288.1-201ENST00000557918 224 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC0.59□□□□□ -2.31
LINC01546A6NGU7 MIR4513-201ENST00000581077 86 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 AC092474.3-201ENST00000603022 568 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 HSPE1P19-201ENST00000603327 295 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 AC013244.2-201ENST00000603396 103 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 AC095031.1-201ENST00000623685 672 ntBASIC0.59□□□□□ -2.31
LINC01546A6NGU7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms