Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 AL353752.1-201ENST00000454946 260 ntBASIC5.62□□□□□ -1.51
USP17L3A6NCW0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 RPL22P13-201ENST00000493291 347 ntBASIC5.62□□□□□ -1.51
USP17L3A6NCW0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 RNU6-927P-201ENST00000516199 100 ntBASIC5.62□□□□□ -1.51
USP17L3A6NCW0 Y_RNA.668-201ENST00000516233 93 ntBASIC5.62□□□□□ -1.51
USP17L3A6NCW0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 AP000827.1-201ENST00000527814 258 ntBASIC5.62□□□□□ -1.51
USP17L3A6NCW0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 Z98751.3-201ENST00000604447 521 ntBASIC5.62□□□□□ -1.51
USP17L3A6NCW0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 AC020634.1-201ENST00000608701 549 ntBASIC5.62□□□□□ -1.51
USP17L3A6NCW0 AL021879.1-201ENST00000611756 288 ntBASIC5.62□□□□□ -1.51
USP17L3A6NCW0 AC034102.8-201ENST00000615146 484 ntBASIC5.62□□□□□ -1.51
USP17L3A6NCW0 U2.1-201ENST00000618978 145 ntBASIC5.62□□□□□ -1.51
USP17L3A6NCW0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
USP17L3A6NCW0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 RNA5SP52-201ENST00000362448 134 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 RNA5SP388-201ENST00000362584 119 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 RNU6-596P-201ENST00000365395 98 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 DEFB109C-201ENST00000382575 264 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 DEFB109B-201ENST00000382656 264 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 Y_RNA.485-201ENST00000384395 102 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 RNU6-790P-201ENST00000384479 105 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 SNORD73A-201ENST00000386062 65 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 SNORA68.2-201ENST00000391263 128 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 RNU6-607P-201ENST00000411283 108 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 SALL4P2-201ENST00000423288 2910 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 RPL26P6-201ENST00000440913 438 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 SCARNA10-201ENST00000459255 330 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 RPL17P19-201ENST00000489069 552 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 AC008716.1-201ENST00000511084 513 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 FKBP1BP1-201ENST00000553366 325 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 AC016727.2-201ENST00000603988 621 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 AC062037.2-201ENST00000610137 73 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 AL591516.1-201ENST00000611326 274 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 AC099669.2-201ENST00000616549 437 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 AL391684.1-202ENST00000641293 1636 ntBASIC5.61□□□□□ -1.51
USP17L3A6NCW0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.61□□□□□ -1.51
USP17L3A6NCW0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 MIR133A2-201ENST00000347538 102 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 RNU6-1074P-201ENST00000383995 104 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 AL080315.1-201ENST00000406055 466 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 U3.35-201ENST00000408405 208 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 RPL23AP2-201ENST00000471227 466 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 AC104564.1-201ENST00000493028 407 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 RN7SL810P-201ENST00000493031 276 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 AC114801.2-201ENST00000503825 781 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 SLC25A15P5-201ENST00000508033 253 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 AC131281.1-201ENST00000522984 164 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.6□□□□□ -1.51
USP17L3A6NCW0 ARF4P1-201ENST00000605447 541 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 AC107871.2-201ENST00000612894 502 ntBASIC5.6□□□□□ -1.51
USP17L3A6NCW0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms