Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC093809.1-201ENST00000509155 340 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC010486.1-201ENST00000511793 424 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC239860.2-201ENST00000525886 270 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC136618.2-201ENST00000575091 400 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 MIR4435-1-201ENST00000582552 80 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 MIR5092-201ENST00000583139 88 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC010620.2-201ENST00000600135 313 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AL353778.1-201ENST00000603149 408 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC018714.1-201ENST00000605028 208 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AL158211.4-201ENST00000606988 584 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 RN7SL853P-201ENST00000617250 223 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC025034.2-201ENST00000623264 286 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC007490.1-201ENST00000624321 703 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC092447.10-201ENST00000620607 1652 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC090740.1-201ENST00000623193 2262 ntBASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.68□□□□□ -1.98
SMIM28A0A1B0GU29 MAPK10-266ENST00000641066 6555 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AP000568.1-201ENST00000282964 442 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 RNA5SP289-201ENST00000362332 137 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 RNU6-97P-201ENST00000363387 104 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 RNU6-723P-201ENST00000383973 107 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 RNU6-114P-201ENST00000384704 105 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 FCF1P1-201ENST00000432690 571 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 RPL23AP35-201ENST00000451906 501 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC091179.1-201ENST00000461606 579 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 RPL23AP45-201ENST00000476406 468 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 FAM172BP-201ENST00000487497 1089 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC104685.1-201ENST00000502445 371 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 POU5F1P7-201ENST00000508759 541 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC022483.1-201ENST00000514020 567 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC009094.1-201ENST00000564443 426 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 RPL23AP84-201ENST00000571193 464 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 MTCO3P24-201ENST00000572729 782 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC105224.1-201ENST00000587055 421 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC021755.4-201ENST00000616620 456 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 AC008443.7-201ENST00000622195 246 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 CUL1P1-201ENST00000509510 2425 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.67□□□□□ -1.98
SMIM28A0A1B0GU29 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AC012321.1-201ENST00000561622 1588 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 RNU5E-8P-201ENST00000363502 116 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 RNU6-853P-201ENST00000364306 107 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 RPS4XP7-201ENST00000406274 780 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 FAT1P1-201ENST00000406588 507 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 RNA5SP508-201ENST00000411327 119 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 PPP1R11P2-201ENST00000423543 382 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 TRIM60P18-201ENST00000441518 828 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 COX6CP2-201ENST00000444980 225 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 MTCYBP3-201ENST00000445588 1137 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AL109741.2-201ENST00000455561 343 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AC104563.1-201ENST00000476147 376 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 RPL9P33-201ENST00000484311 566 ntBASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.66□□□□□ -1.98
SMIM28A0A1B0GU29 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms