Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA1Q9Y5H4 AC006378.2-201ENST00000623178 2476 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 TXNP7-201ENST00000406296 293 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 AL359704.1-201ENST00000411586 781 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 AC012498.1-201ENST00000424037 437 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 AL512844.2-201ENST00000433990 593 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 AL133217.1-201ENST00000450980 425 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 RPS26P21-201ENST00000475397 348 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 MTND1P22-201ENST00000510572 951 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 TGIF1P1-201ENST00000558095 802 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 AC060771.1-201ENST00000582031 164 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 MIR3124-201ENST00000582636 67 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 AC013553.2-201ENST00000604244 589 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 AL161729.4-201ENST00000604650 476 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 AC116312.1-201ENST00000606841 314 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 AL603758.1-201ENST00000618654 241 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 AC079248.2-201ENST00000623779 326 ntBASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHGA1Q9Y5H4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 OR4G2P-202ENST00000641004 1759 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 RNU6-301P-201ENST00000384277 107 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 RNU4-72P-201ENST00000410754 173 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 RN7SKP284-201ENST00000411002 343 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 Z85995.1-201ENST00000415547 335 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 VPS26BP1-201ENST00000417155 755 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 RPS6P15-201ENST00000431996 751 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 CBWD4P-201ENST00000445695 655 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 ART2BP-201ENST00000453501 499 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AP1S2P1-201ENST00000457344 379 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 RNU7-125P-201ENST00000458760 62 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 MTND4LP3-201ENST00000468320 276 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AC068587.2-201ENST00000478386 781 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AC008885.1-201ENST00000514930 301 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 SNORA31.26-201ENST00000517250 137 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AL357094.1-201ENST00000603845 844 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AC022149.2-201ENST00000621061 203 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AC007998.5-201ENST00000622938 237 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 AC000403.1-201ENST00000613696 3585 ntBASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA1Q9Y5H4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 CCT4P2-201ENST00000233836 1548 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 RNU1-105P-201ENST00000363470 161 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 RNU6-198P-201ENST00000384258 104 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AC126124.2-201ENST00000413542 321 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AL365203.2-201ENST00000423444 196 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AC104332.2-201ENST00000429959 156 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AC129850.1-201ENST00000436203 508 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 PIGFP3-201ENST00000441918 722 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 RPL7P36-201ENST00000444633 681 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 RPL30P6-201ENST00000475925 342 ntBASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHGA1Q9Y5H4 RNU6-1256P-201ENST00000516539 103 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms