Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
PCDHGA9Q9Y5G4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHGA9Q9Y5G4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHGA9Q9Y5G4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 MIR331-201ENST00000362302 94 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU6-1167P-201ENST00000363227 94 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 Y_RNA.303-201ENST00000364998 94 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU6-116P-201ENST00000384042 109 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU4-26P-201ENST00000410270 107 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 AL132765.1-201ENST00000434165 553 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 AC008264.1-201ENST00000447612 367 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 RPL21P99-201ENST00000480369 423 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 AC104164.2-201ENST00000496953 495 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU1-61P-201ENST00000516107 151 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 RANP9-201ENST00000519957 271 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 IGLV3-26-201ENST00000520756 302 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 SUMO2P20-201ENST00000520803 283 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 TRAV8-5-201ENST00000537369 341 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 AC005730.3-201ENST00000583067 366 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 MIR4424-201ENST00000585257 86 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 AC025946.2-201ENST00000603398 234 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 AL357078.3-201ENST00000607528 618 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 MIR92B-201ENST00000607575 96 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 AL390240.1-201ENST00000612950 384 ntBASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA9Q9Y5G4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 LARP1BP1-201ENST00000506036 1359 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 UBE2L2-201ENST00000254302 429 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AC007685.1-201ENST00000329806 452 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 Y_RNA.86-201ENST00000363020 111 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 RNA5SP151-201ENST00000365632 117 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU6-38P-201ENST00000384085 107 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 MIR514A2-201ENST00000385131 88 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 MIR514A3-201ENST00000385132 88 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 RPL21P91-201ENST00000429231 479 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 TAAR7P-201ENST00000436141 242 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU6-333P-201ENST00000459117 107 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 SNORA84-201ENST00000459229 133 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AL132838.2-201ENST00000492041 314 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 RN7SL812P-201ENST00000493791 279 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AC104136.1-201ENST00000512969 394 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AC046134.1-201ENST00000514454 666 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 RNA5SP154-201ENST00000516193 111 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AC004024.1-201ENST00000549244 247 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AC078814.3-201ENST00000553036 491 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 HSPE1P5-201ENST00000561489 272 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 UBE2V2P2-201ENST00000587677 504 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 RNU6-89P-201ENST00000606519 100 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 AC090132.2-201ENST00000615881 347 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA9Q9Y5G4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms