Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC084824.5-201ENST00000612009 413 ntBASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RHBDD3Q9Y3P4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 MIR9-1-201ENST00000385198 89 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AL360182.1-201ENST00000397433 468 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AL590084.2-201ENST00000401481 382 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 SNORA11.1-201ENST00000408133 129 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 NDUFS5P4-201ENST00000412983 318 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AL161449.1-201ENST00000414531 1199 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 USP9YP21-201ENST00000420603 432 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC013262.1-201ENST00000426710 252 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC007560.1-201ENST00000426912 237 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 USP12PX-201ENST00000432383 1057 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 RPL35AP22-201ENST00000436855 335 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC107083.1-201ENST00000439643 279 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC098831.1-201ENST00000440661 216 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC011816.1-201ENST00000441346 546 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC097493.1-201ENST00000463958 372 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 RPL31P50-201ENST00000471002 296 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC104563.1-201ENST00000476147 376 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AL160314.1-201ENST00000490836 438 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC008427.1-201ENST00000503102 655 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC023141.11-201ENST00000508864 202 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 XKRY-201ENST00000510392 1100 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 RN7SKP132-201ENST00000516001 208 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC009127.3-201ENST00000570531 403 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 TPMTP1-201ENST00000592307 737 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 RPS15AP11-201ENST00000594193 385 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 BBIP1P1-201ENST00000602999 279 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AL357094.1-201ENST00000603845 844 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 ATP1B3P1-201ENST00000605365 821 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC005000.2-201ENST00000605468 310 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AL138478.1-201ENST00000612252 832 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC135507.2-201ENST00000612443 309 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AP002791.1-201ENST00000623291 381 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC073592.7-201ENST00000623659 507 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 CU459211.1-201ENST00000635667 749 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 AC004944.1-201ENST00000517807 3059 ntBASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RHBDD3Q9Y3P4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 MIR6073-201ENST00000352083 89 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 RNU6-884P-201ENST00000363889 107 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 DEFA7P-201ENST00000382676 285 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 RNU2-72P-201ENST00000411175 163 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 USP9YP20-201ENST00000419224 558 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 C1DP1-201ENST00000426049 402 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 MED14P1-201ENST00000430517 648 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AC021382.1-201ENST00000483523 359 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 COX6CP8-201ENST00000522620 226 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 OR6C7P-201ENST00000547875 934 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AC005951.2-201ENST00000576282 495 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 ELOCP29-201ENST00000588193 334 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 OR10AB1P-201ENST00000609613 938 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AC005332.10-201ENST00000612725 619 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AC010133.1-201ENST00000615809 842 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AC007998.5-201ENST00000622938 237 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AC068057.2-201ENST00000624047 895 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 AC131280.1-202ENST00000624067 4211 ntBASIC2.25□□□□□ -2.05
RHBDD3Q9Y3P4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AC110491.1-201ENST00000562191 2010 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 OR5J1P-201ENST00000313544 939 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 Y_RNA.110-201ENST00000363220 99 ntBASIC2.24□□□□□ -2.05
RHBDD3Q9Y3P4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms