Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 AC121334.2-201ENST00000605387 271 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 AC112204.3-201ENST00000623822 332 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 CR381653.2-201ENST00000624041 768 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 AC073346.2-201ENST00000624724 2058 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.46□□□□□ -1.85
SIX4Q9UIU6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 RNU4-1-201ENST00000363925 141 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 RNY4P16-201ENST00000364768 94 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 RPL23AP32-201ENST00000395315 459 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 GSTA9P-201ENST00000406231 611 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AC006548.1-201ENST00000427470 102 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 UBE2V1P8-201ENST00000437166 265 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 CST9LP2-201ENST00000437612 320 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 SNORD121B-201ENST00000458838 81 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 snoU109.4-201ENST00000458953 143 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 snoU13.3-201ENST00000459441 104 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 KCTD9P5-201ENST00000504141 1170 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AC114967.1-201ENST00000504890 259 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 RNU6-718P-201ENST00000516166 105 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 NRBF2P1-201ENST00000587407 859 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AL355812.1-201ENST00000603215 216 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 RBM11P1-201ENST00000604951 799 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AC011816.2-201ENST00000607089 556 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AC092954.2-201ENST00000609103 430 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 U4.5-201ENST00000617137 123 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AC002550.2-201ENST00000621246 394 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 CR381572.1-201ENST00000625098 102 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AL159972.1-201ENST00000625150 448 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 MIR6863-201ENST00000636112 90 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 LRRC77P-213ENST00000637727 880 ntBASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SIX4Q9UIU6 AC007496.3-201ENST00000624987 3443 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AL157700.1-201ENST00000561973 1432 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 U3.19-201ENST00000390893 196 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 MRPL42P2-201ENST00000403169 426 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 Z98941.1-201ENST00000407764 100 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC127391.1-201ENST00000411737 98 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 MTND1P21-201ENST00000412991 285 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 EI24P1-201ENST00000416584 867 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 MTND3P17-201ENST00000416968 344 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC007283.2-201ENST00000424739 197 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 UBE2V1P13-201ENST00000436983 439 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AL359385.1-201ENST00000456509 365 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC109925.1-201ENST00000478069 331 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC010587.1-201ENST00000505809 469 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 MIR5004-201ENST00000579078 107 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC090616.5-202ENST00000582111 297 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 MIR5195-201ENST00000583555 115 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC010928.3-201ENST00000587712 541 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC068790.3-201ENST00000602988 553 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC245014.2-201ENST00000603689 287 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AL161756.2-201ENST00000604597 246 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC246785.4-201ENST00000605374 287 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AL133173.2-201ENST00000614270 90 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC090517.2-201ENST00000614966 680 ntBASIC3.45□□□□□ -1.86
SIX4Q9UIU6 AC124864.2-201ENST00000624736 186 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms