Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 RNU7-26P-201ENST00000458980 63 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 FAM172BP-201ENST00000487497 1089 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AC008427.1-201ENST00000503102 655 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 RNA5SP24-201ENST00000516478 95 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 RNU6-1028P-201ENST00000517164 93 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AMZ2P1-203ENST00000565833 850 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AC090615.1-201ENST00000577519 154 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 MIR3912-201ENST00000577566 105 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 MIR4658-201ENST00000584344 65 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 VN1R78P-201ENST00000597393 564 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AP001429.1-201ENST00000602568 530 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AC068620.3-201ENST00000602749 560 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AL590099.1-201ENST00000615276 138 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 OR5H6-203ENST00000642105 978 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 AL356473.1-201ENST00000406203 1408 ntBASIC2.3□□□□□ -2.04
TREX1Q9NSU2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
TREX1Q9NSU2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.29□□□□□ -2.04
TREX1Q9NSU2 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TREX1Q9NSU2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.29□□□□□ -2.04
TREX1Q9NSU2 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
TREX1Q9NSU2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
TREX1Q9NSU2 RNU6-224P-201ENST00000384055 107 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 RNU6-76P-201ENST00000384060 104 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 RNU6-1122P-201ENST00000384449 107 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 Y_RNA.510-201ENST00000384511 114 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 Z75741.2-201ENST00000417272 1167 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 AC007435.1-201ENST00000421086 415 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 MRPS36P1-201ENST00000421291 307 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 MTCO2P5-201ENST00000422621 426 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 PTP4A1P7-201ENST00000423476 514 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 GTF2IP7-202ENST00000436677 309 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.29□□□□□ -2.04
TREX1Q9NSU2 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.29□□□□□ -2.04
TREX1Q9NSU2 RNU7-23P-201ENST00000459465 62 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 HSPE1P6-201ENST00000479457 291 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 AC108734.3-201ENST00000481241 1165 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 AC090096.1-201ENST00000489168 390 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 MTCYBP17-201ENST00000503579 789 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 HMGB1P28-201ENST00000507778 552 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.29□□□□□ -2.04
TREX1Q9NSU2 ATP5F1P5-201ENST00000526403 760 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.29□□□□□ -2.04
TREX1Q9NSU2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
TREX1Q9NSU2 AL355877.2-201ENST00000603670 358 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.29□□□□□ -2.04
TREX1Q9NSU2 AC004067.1-201ENST00000608733 700 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 AC007998.5-201ENST00000622938 237 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TREX1Q9NSU2 AL136360.1-201ENST00000503377 1900 ntBASIC2.29□□□□□ -2.04
TREX1Q9NSU2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AL139276.1-201ENST00000311910 1001 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 RNU1-52P-201ENST00000384190 164 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 SNORA36C-201ENST00000384289 132 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 RNU6-1035P-201ENST00000384477 107 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 MTCO1P56-201ENST00000401674 224 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AL592310.1-201ENST00000414330 671 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 USP9YP21-201ENST00000420603 432 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC018630.2-202ENST00000422992 927 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC098614.2-201ENST00000426040 255 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC233279.1-201ENST00000455300 423 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 RPL31P50-201ENST00000471002 296 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC069528.1-202ENST00000482888 637 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 EIF4EP3-201ENST00000498782 656 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC114981.1-201ENST00000503897 678 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 MRPS36P2-201ENST00000512569 299 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC093677.1-201ENST00000514414 678 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 RNU6-1225P-201ENST00000516336 65 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 BTF3P12-201ENST00000519620 469 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AP000889.2-201ENST00000532684 490 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC126365.2-201ENST00000580630 379 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms