Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC079395.1-201ENST00000510981 262 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC008716.1-201ENST00000511084 513 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC096725.1-201ENST00000514266 313 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 RNU6-714P-201ENST00000516963 103 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AP003467.2-201ENST00000520175 319 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 OR6C7P-201ENST00000547875 934 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC079600.2-201ENST00000550076 130 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 OR4K7P-201ENST00000580232 945 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC011471.1-201ENST00000585766 187 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 ELOCP29-201ENST00000588193 334 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AL158211.4-201ENST00000606988 584 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 RNU4-5P-201ENST00000607255 135 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC004067.1-201ENST00000608733 700 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AC022306.3-201ENST00000619930 550 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 AL445264.1-201ENST00000621719 171 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 ZNF833P-201ENST00000424938 1494 ntBASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.19□□□□□ -2.06
EXOSC4Q9NPD3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 RNU6-859P-201ENST00000362728 107 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 RNU4-68P-201ENST00000364314 141 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 SNORA68.1-201ENST00000364537 132 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 RNU6-76P-201ENST00000384060 104 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 Y_RNA.465-201ENST00000384293 102 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 SNORA41-201ENST00000384675 132 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 MIR144-201ENST00000384886 86 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 TAS2R15P-201ENST00000390674 928 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 SNORA48.2-201ENST00000390926 124 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 MIR1284-201ENST00000408337 120 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 MIR1290-201ENST00000408735 78 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 NDUFB4P7-201ENST00000423198 363 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 UBE2V1P13-201ENST00000436983 439 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AC107083.1-201ENST00000439643 279 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 RNU7-23P-201ENST00000459465 62 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 FAM172BP-201ENST00000487497 1089 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AC022483.1-201ENST00000514020 567 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AC103783.1-201ENST00000520506 373 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AC061975.8-201ENST00000587058 721 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AC011451.2-201ENST00000604303 598 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AL139022.2-201ENST00000606934 443 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AC073308.1-201ENST00000623696 305 ntBASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
EXOSC4Q9NPD3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 RNU5A-1-201ENST00000362698 116 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 RNU1-105P-201ENST00000363470 161 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 RNU6-777P-201ENST00000364265 104 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 SNORD114-30-201ENST00000364448 72 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 RNU6-7-201ENST00000364784 107 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 RNU6-8-201ENST00000365467 107 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 RNU6-1207P-201ENST00000384343 107 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 MIR767-201ENST00000390228 109 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 AL360182.1-201ENST00000397433 468 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 AL122016.1-201ENST00000403365 367 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 RPS4XP7-201ENST00000406274 780 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 VN1R51P-201ENST00000411675 945 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 Z85995.1-201ENST00000415547 335 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 AC092648.1-201ENST00000425870 423 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 ZYG11AP1-201ENST00000430329 837 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 AL512844.2-201ENST00000433990 593 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 RPS25P9-201ENST00000435591 252 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 AL031313.1-201ENST00000448435 256 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 ARPC3P5-201ENST00000448802 534 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 RPL21P134-201ENST00000453468 483 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 USP9YP25-201ENST00000457708 443 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 AC092798.1-201ENST00000458542 409 ntBASIC2.17□□□□□ -2.06
EXOSC4Q9NPD3 snoU13.8-201ENST00000458890 104 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 242 ms