Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 CASC19-280ENST00000642102 1351 ntBASIC4.4□□□□□ -1.71
VTA1Q9NP79 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
VTA1Q9NP79 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VTA1Q9NP79 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VTA1Q9NP79 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VTA1Q9NP79 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 RNU6-451P-201ENST00000362921 107 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 Y_RNA.157-201ENST00000363638 102 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 RNU5E-4P-201ENST00000364931 120 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 MT-TL1-201ENST00000386347 75 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC068050.1-201ENST00000394891 380 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
VTA1Q9NP79 AL354719.1-201ENST00000406535 843 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 MIR1290-201ENST00000408735 78 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC012498.1-201ENST00000424037 437 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC091286.1-201ENST00000431233 461 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 ATP5JP1-201ENST00000431631 322 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 MTND1P18-201ENST00000448191 573 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC006512.1-201ENST00000468816 291 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC069439.1-201ENST00000494739 167 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC091885.1-201ENST00000506658 268 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 GMPSP1-201ENST00000514075 579 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 RNU6-390P-201ENST00000516259 103 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 IGLV3-26-201ENST00000520756 302 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC015917.1-201ENST00000579654 510 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 AL357078.3-201ENST00000607528 618 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC010133.1-201ENST00000615809 842 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC092794.2-201ENST00000620933 563 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 AC093648.1-201ENST00000623546 606 ntBASIC4.39□□□□□ -1.71
VTA1Q9NP79 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
VTA1Q9NP79 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VTA1Q9NP79 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VTA1Q9NP79 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
VTA1Q9NP79 SNORA72.1-201ENST00000363485 129 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 SNORA51.2-201ENST00000364595 132 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 MIR199A2-201ENST00000385289 110 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 AL136116.1-201ENST00000403591 381 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 AC093578.1-201ENST00000415219 368 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VTA1Q9NP79 RPL27AP8-201ENST00000424277 446 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.38□□□□□ -1.71
VTA1Q9NP79 RPL26P6-201ENST00000440913 438 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.38□□□□□ -1.71
VTA1Q9NP79 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.38□□□□□ -1.71
VTA1Q9NP79 snoU13.4-201ENST00000458916 104 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 RPS26P28-201ENST00000470806 348 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 RPL23AP11-201ENST00000475260 469 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 RPL31P13-201ENST00000484151 370 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.38□□□□□ -1.71
VTA1Q9NP79 RPL23AP55-201ENST00000498163 452 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 AC005921.1-201ENST00000510589 286 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.38□□□□□ -1.71
VTA1Q9NP79 RNA5SP164-201ENST00000516533 110 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 RNA5SP503-201ENST00000517047 117 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 RN7SKP258-201ENST00000517151 304 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VTA1Q9NP79 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.38□□□□□ -1.71
VTA1Q9NP79 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.38□□□□□ -1.71
VTA1Q9NP79 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VTA1Q9NP79 AL391261.4-201ENST00000616012 481 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 AC009033.1-201ENST00000624279 431 ntBASIC4.38□□□□□ -1.71
VTA1Q9NP79 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VTA1Q9NP79 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VTA1Q9NP79 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
VTA1Q9NP79 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VTA1Q9NP79 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VTA1Q9NP79 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.37□□□□□ -1.71
VTA1Q9NP79 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VTA1Q9NP79 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
VTA1Q9NP79 RNU6-876P-201ENST00000391295 104 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VTA1Q9NP79 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.37□□□□□ -1.71
VTA1Q9NP79 SYF2P2-201ENST00000417620 583 ntBASIC4.37□□□□□ -1.71
VTA1Q9NP79 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.37□□□□□ -1.71
VTA1Q9NP79 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.37□□□□□ -1.71
VTA1Q9NP79 SDCBPP3-201ENST00000419629 891 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms